Gene SeD_A1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1150 
SymbolhelD 
ID6871612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1144913 
End bp1146967 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content55% 
IMG OID642784334 
ProductDNA helicase IV 
Protein accessionYP_002215008 
Protein GI198241992 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA AAGCAACTTC TCTTGGAAAA CGTCTGGCGC AACACCCGTA TGATCGTGCC 
GAGATCCTCA ACGCTGGGGT GAAAGTGTCT GGCGACAGGC ATGAATATCT TATTCCATTC
AATCAGTTAT TGGCGATTCA CTGTAAGCGT GGGCTGGTAT GGGGCGAGCT GGAGTTTGTC
CTGCCGGAGG ATAAAGTCGT GCGTTTGCAC GGTACCGAGT GGTCGGAAAC CCAGCAATTC
CATCGCTATC TGGACGCGCA CTGGCGTCGC TGGAGCCAGG AGATGAGTGA TGTCGCCGCG
CAGGCATTAC AGGAGCAATG GGCGCGTATT AGTGAGCGAA CGGGCGAAAA CCAATGGCTT
ACCCGTGAAC GCGTTCGGGG GCTGGAACAC GAAATTCGCC AGACGTTTGC CGCCTTACCG
CTGCCGGTCT CACGTCTGGA GGAGTTTGCT CACTGTCGCG AGATATGGCG TAAGTGTCTG
GCATGGTTAC AGGATAGCGA GGGAAGTCGG CAGCAGCATA ATCAGGCGTA TGCTGATGCC
ATGCTGGAAG CGCATGCCGA CTTTTTTACG CAGATAGAAT CCTCTCCGCT TAATCCTTCC
CAGGCCAGGG CGGTGGTTAA CGGCGAATCA TCGTTACTGG TACTGGCGGG TGCGGGAAGC
GGCAAGACCT CGGTGCTGGT GGCGCGCGCG GGTTGGCTGT TGGCGCGCGG ACAAGCCGAT
GTGGGGCAAA TTCTTTTACT GGCGTTTGGT CGCAAGGCGG CAGAAGAGAT GGATGAGCGT
ATCCGCGAGC GCTTACATAC GGAAGAGATT ACTGCCCGTA CGTTCCATTC GCTGGCGCTG
TATATTATTC AGCAAGGCAG TAAAAAAGCG CCGGTTATCA GTAAGCTGGA AAGTGACGCC
ACCGCGCGGC ATCAGCTATT TCTGCGCACC TGGCGTCAGC AGTGTAGCGA GAAAAAAGCG
CAGGCCAAAG GCTGGCGTCA GTGGCTGGAA GAGGAGATGC AGTGGGTAGT GCCGGAAGGT
AATTTCTGGG ACGATGAGAC ATTGCAGCGG CGTCTGGCCC CTCGCCTGGA TCGTTGGGTC
AGTTTGATGC GTATGCACGG CGGCGCGCAG GCAGAAATGA TCGCTGGCGC GCCAGAGGAG
TGCCGCGAGC TGTTTGGCAA ACGCATTAAG CTGATGGCGC CGCTGCTAAA GGCCTGGAAA
AGCGCGTTGA AAGCGGAAAA TGCCGTTGAT TTCTCCGGGC TGATCCATCA GGCAATGGTG
ATCCTCGAAA AAGGGCGTTT TATCAGCCCG TGGAAGCATA TTCTGGTCGA TGAATTTCAG
GATATTTCCC CGCAACGGGC GGCGCTGTTA GAGGCGCTGC GCAAGCAGAA TAGCCAGACT
ACGCTGTTTG CCGTTGGCGA TGACTGGCAG GCGATTTACC GTTTTAGCGG GGCGCAGCTC
TCCTTAACGA CGGCGTTTCA TCAGACGTTC GGCGAGGGCG AGCATTGCCA CCTGGACACC
ACGTACCGCT TTAACAGTCG GATTGGCGAT ATTGCCAATC GCTTTGTACA GCAGAATCCG
CACCAGCTTA AAAAACCGTT AAATAGTCTG ACCCCAGGCG ATAAAAAAGC GGTGACGTTA
TTGGATGAAA GCCAGTTGGA CGCGTTACTG GATAAATTAT CCGGCTATGC GAAGGAAGAT
GAACGTATCC TGGTGCTGGC GCGCTATCAT CATCTGAAAC CCGCGAGTCT ACAAAAAGCG
GCGACTCGCT GGCCGAAGTT ACAGATAGAC TTCATGACTA TCCATGCCAG CAAAGGCCAA
CAGGCCGATT ACGTGATTCT TGTCGGATTG CAGGAGGGTA ACGACGGTTT CCCCGCCCCG
GCGCGCGAAT CCATTATGGA AAGTGCGCTT CTTCCTCAGG TTGAGGATTT TCCGGACGCT
GAAGAGCGGC GTTTGTTATA TGTGGCGTTG ACGCGCGCGC GTGCGCGGGT CTGGCTGCTT
TTCAATAAAG ATAATCCCTC GCGCTTTGTG GAGGCGCTTA AACAGCTGGA TGTGCCGGTG
GCGAGGAAGC CCTAA
 
Protein sequence
MELKATSLGK RLAQHPYDRA EILNAGVKVS GDRHEYLIPF NQLLAIHCKR GLVWGELEFV 
LPEDKVVRLH GTEWSETQQF HRYLDAHWRR WSQEMSDVAA QALQEQWARI SERTGENQWL
TRERVRGLEH EIRQTFAALP LPVSRLEEFA HCREIWRKCL AWLQDSEGSR QQHNQAYADA
MLEAHADFFT QIESSPLNPS QARAVVNGES SLLVLAGAGS GKTSVLVARA GWLLARGQAD
VGQILLLAFG RKAAEEMDER IRERLHTEEI TARTFHSLAL YIIQQGSKKA PVISKLESDA
TARHQLFLRT WRQQCSEKKA QAKGWRQWLE EEMQWVVPEG NFWDDETLQR RLAPRLDRWV
SLMRMHGGAQ AEMIAGAPEE CRELFGKRIK LMAPLLKAWK SALKAENAVD FSGLIHQAMV
ILEKGRFISP WKHILVDEFQ DISPQRAALL EALRKQNSQT TLFAVGDDWQ AIYRFSGAQL
SLTTAFHQTF GEGEHCHLDT TYRFNSRIGD IANRFVQQNP HQLKKPLNSL TPGDKKAVTL
LDESQLDALL DKLSGYAKED ERILVLARYH HLKPASLQKA ATRWPKLQID FMTIHASKGQ
QADYVILVGL QEGNDGFPAP ARESIMESAL LPQVEDFPDA EERRLLYVAL TRARARVWLL
FNKDNPSRFV EALKQLDVPV ARKP