Gene SeD_A1149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1149 
Symbol 
ID6875673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1144343 
End bp1144789 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID642784333 
Producthypothetical protein 
Protein accessionYP_002215007 
Protein GI198242366 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCG TTCTGAATAT TTTAAACTTT GTACTGGGCG GCTTTGCCAC TACGCTGGCC 
TGGCTGCTGG CGACGCTTGT CAGTATTGTG CTTATTTTTA CCCTGCCGTT GACCCGCTCC 
TGCTGGGAGA TAACCAAACT GTCCCTGTTC CCTTACGGTA ATGAAGCCAT TCACGTTGAC 
GAACTTAATC CGGCGGCGAA AAGCGTATTA ATGAATACTG GCGGTACATT GCTGAATATT 
TTCTGGTTAC TTTTTTTCGG CTGGTGGCTA TGCCTGATGC ACATTGCCTC CGGTATCGCT 
CAGTGTGTCA CTATCATCGG GATACCTGTC GGTATTGCGA ACTTTAAAAT TGCCGCGATT 
GCGCTTTGGC CTGTCGGTCG CCGCGTCGTC TCTGTAGAAA CCGCTCGCGC CGCGCGAGAA 
GCTAACGCGC GCCGCCGTTT TGAATGA
 
Protein sequence
MRTVLNILNF VLGGFATTLA WLLATLVSIV LIFTLPLTRS CWEITKLSLF PYGNEAIHVD 
ELNPAAKSVL MNTGGTLLNI FWLLFFGWWL CLMHIASGIA QCVTIIGIPV GIANFKIAAI 
ALWPVGRRVV SVETARAARE ANARRRFE