Gene SeD_A1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1147 
Symbol 
ID6873957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1141579 
End bp1142184 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID642784331 
ProductTfoX family protein 
Protein accessionYP_002215005 
Protein GI198245255 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.303148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAC TCTCTTATGA CAGGATCTAT AAATCGCAAG AATATTTGGC CTCTTTGGGG 
ACGATCCAGT ATCGATCTTT ATTCGGTAGC TATAGTCTGA CCGTGGAGGA TACCGTCTTT 
GCGATGGTGG CTAATGGCGA GCTTTATCTC CGCGCCTGTG AAGAAAGCGT ACCCTACTGT 
GTGAAGCATC CCCCCGCCTG GCTCATGTTT ATGAAATGTG GACGTCCCGT TATGCTCAAC 
TATTACCGGG TGGATGAAAG CCTGTGGCGC GATCAGCAGC AGCTGGTACG TTTATCGAAG 
TATTCTCTTG ACGCGGCAAT GAAGGAAAAA CACAGCCGTA TTTTACAGCA CAGACTCAAA 
GATCTTCCCA ATATGACCTT CCATCTGGAA ACATTGCTCA ATGAGTCAGG GATAAAGGAC 
GAAAATATGT TACGCATACT GGGCGCGAAA ATGTGCTGGC TAAGGTTGCG ACAAAGCAAT 
CCCTTGCTGA CGGTGAAAGT TTTGTATGCC CTGGAAGGCG CAATTGTCGG CGTACATGAA 
GCGGCGCTCC CGGCGAGTCG TCGCCAGGAG CTTGCCGACT GGGCTCATTC GCTTACGGCT 
GGGTAA
 
Protein sequence
MRALSYDRIY KSQEYLASLG TIQYRSLFGS YSLTVEDTVF AMVANGELYL RACEESVPYC 
VKHPPAWLMF MKCGRPVMLN YYRVDESLWR DQQQLVRLSK YSLDAAMKEK HSRILQHRLK 
DLPNMTFHLE TLLNESGIKD ENMLRILGAK MCWLRLRQSN PLLTVKVLYA LEGAIVGVHE 
AALPASRRQE LADWAHSLTA G