Gene SeD_A1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1139 
Symbol 
ID6871376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1133664 
End bp1135304 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content51% 
IMG OID642784323 
Productparaquat-inducible protein B 
Protein accessionYP_002214997 
Protein GI198243917 
COG category[R] General function prediction only 
COG ID[COG3008] Paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0102675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCTA AAAAAGGGGA AGCCAAAGTA CAAAAGGTGA AAAATTGGTC GCCTGTCTGG 
ATATTCCCGA TTGTTACTGC GCTTATCGGA GCCTGGATTC TGTTTTATCA CTACAGCCAC 
CAGGGACCGG AAGTTACCTT AATCACCACC AATGCGGAAG GCATTGAAGG CGGAAAAACG 
ACGATCAAAA GTCGCAGCGT GGATGTTGGC GTGGTTGAAA GCGCGACGCT GACTGACGAT 
CTGACCCACG TACAAATCAA AGCGCGGCTC CATTCCGGTA TGGAAAAGTT GCTGCATAAA 
GACTCGGTAT TTTGGGTGGT AAAACCGCAG GTGGGGCGTG AAGGCATCAG CGGGCTTGGG 
ACGCTGCTAT CAGGTGCGTA TATTGAACTA CAACCAGGAA GTAAGGGCAG TCAGCCGGAA 
AGCTATCAGC TTCTTGACTC ACCGCCGTTG GCGCCGCCCG ATGCCAAAGG TATTCGTGTG 
ATTCTGGACA GCAAAAAGGC CGGTCAGCTC AGTCCTGGCG ATCCCGTTCT GTTCCGGGGC 
TATCGGGTAG GGTCCGTTGA AACCAGCTCT TTCGATCCGC AAAAACGGAC AATGAGTTAT 
CAGTTGTTCA TTAAGGCGCC AAACGATCGG TTGGTCACCA GTAATGTCCG ATTCTGGAAA 
GATAGCGGTA TCGCTGTGGA TCTGACATCG GCGGGAATGC GCGTGGAAAT GGGATCGTTG 
ACGACGTTGT TTGGCGGCGG CGTGAGTTTT GATGTGCCGG AAGGACTTGA GCAGGGGCAA 
CCCGTCGCCG AAAAAACGGC GTTTAATCTC TACGACGATC AAAAAAGTAT TCAGGATTCG 
CTGTATACCG ATCATATCGA TTACCTGATG TTCTTTAAAG ATTCGGTGCG CGGATTACAA 
CCCGGCGCGC CGCTGGAGTT CCGCGGTATT CGTCTGGGGA CGGTAAGCAA AGTGCCTTTC 
TTTGCGTCTA AAATGCGCCA GGTATTTAAC GACGATTACC GTATTCCTGT GCTGGTGCGC 
ATTGAACCGG AGCGTCTGAA AGCGCAATTG GGAGAAAATG CGGATGTTGG CGCGCATTTG 
ACGGAACTGC TTAAGCGCGG TTTACGCGCT TCGCTTAAAA CCGGTAACCT GGTGACCGGG 
GCGCTGTATG TCGATCTGGA CTTTTATCCT AAGGAGCCGC CGATTACCGG GCTACGCGAA 
TTTGATGGTT ATGAAATTAT TCCCACCGTC AGCAGCGGCC TGGCGCAAAT TCAACAGCGA 
CTGGTGGAAA CGTTGGATAA GATCAACAAC CTGCCGCTGA ATCCGATGAT TGAACAAGCG 
ACCAATACGC TGTCTGAAAG CCAGCGTACT ATGCGTCGGC TGCAAACCAC GCTGGATAAT 
ATGAACAAGA TTACCTCCAG TCAGTCGATG CAGCAGCTTC CGGCGGATAT GCAAACGACG 
TTACGCGAAC TTAACCGCAG TATGCAGGGC TTCCAGCCTG GATCGGCGGC GTATAACAAA 
ATGGTGGCGG ATATGCAGCG TCTCGATCAG GTGCTTCGTG AGTTACAACC GGTGTTGAAA 
ACTCTGAACG AGAAGAGCAA CGCGCTGGTA TTTGAAGCGA AGGATAAAAA AGATCCTGAG 
CCTAAGAGGG CGAAACAATG A
 
Protein sequence
MEPKKGEAKV QKVKNWSPVW IFPIVTALIG AWILFYHYSH QGPEVTLITT NAEGIEGGKT 
TIKSRSVDVG VVESATLTDD LTHVQIKARL HSGMEKLLHK DSVFWVVKPQ VGREGISGLG 
TLLSGAYIEL QPGSKGSQPE SYQLLDSPPL APPDAKGIRV ILDSKKAGQL SPGDPVLFRG 
YRVGSVETSS FDPQKRTMSY QLFIKAPNDR LVTSNVRFWK DSGIAVDLTS AGMRVEMGSL 
TTLFGGGVSF DVPEGLEQGQ PVAEKTAFNL YDDQKSIQDS LYTDHIDYLM FFKDSVRGLQ 
PGAPLEFRGI RLGTVSKVPF FASKMRQVFN DDYRIPVLVR IEPERLKAQL GENADVGAHL 
TELLKRGLRA SLKTGNLVTG ALYVDLDFYP KEPPITGLRE FDGYEIIPTV SSGLAQIQQR 
LVETLDKINN LPLNPMIEQA TNTLSESQRT MRRLQTTLDN MNKITSSQSM QQLPADMQTT 
LRELNRSMQG FQPGSAAYNK MVADMQRLDQ VLRELQPVLK TLNEKSNALV FEAKDKKDPE 
PKRAKQ