Gene SeD_A1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1124 
Symbol 
ID6873939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1117384 
End bp1117965 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID642784309 
Producttail fiber assembly like-protein 
Protein accessionYP_002214983 
Protein GI198241967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTA AAATGAGCGA ACAGGCGCAG ACAATTAAAA TTTTCAATCT GCGTTCAGAT 
ACTAACGAAT TTATTGGTGC AGGTGATGCG TATATTCCGC CGCACACAGG ACTACCGGCA 
AACTGTACTG ATATCGCCCC TCCTGATATT CCCGCCAGTC ATATTGCTAT ATTTGACGCT 
GAAACCCAGA CATGGAGTTT GCATGAGGAT CACCGCGGCG AGATGGTTTA CGACACAACA 
ACCGGCAATC AGGTTTATAT CTCCGCTCCT GGTCCGTTGC CCGAAAATGT CACATCAGTT 
TCACCAGGTG GTGAATACCA GAAATGGGAT GGTAAGGCTA AGGTCTGGGT AAAAGACGAA 
GCGGCTGAAA AAGCAGCGCA GCTTCGTCAG GCGGAAGAAA CCAAAAGCCG TCTTTTGCAA 
ATGGCATCTG AAAAAATCGC GCCATTGCAG GATGCAGTTG ATCTTGGAAT CGCAACAGAT 
GATGAGAAAG CGCGGCTCGA CGAATGGAAA AAATATAGGG TGCTGGTAAA CCGGATGGAT 
ACAGCCGCCC CTGACTGGCC GGAAAGACCA GCCAGCCAGT AG
 
Protein sequence
MTFKMSEQAQ TIKIFNLRSD TNEFIGAGDA YIPPHTGLPA NCTDIAPPDI PASHIAIFDA 
ETQTWSLHED HRGEMVYDTT TGNQVYISAP GPLPENVTSV SPGGEYQKWD GKAKVWVKDE 
AAEKAAQLRQ AEETKSRLLQ MASEKIAPLQ DAVDLGIATD DEKARLDEWK KYRVLVNRMD 
TAAPDWPERP ASQ