Gene SeD_A1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1096 
Symbol 
ID6873620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1094164 
End bp1094778 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content54% 
IMG OID642784281 
Productlytic enzyme 
Protein accessionYP_002214955 
Protein GI198242009 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0104377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGT CTCAATTTCA GCAGGCGGCT GGTATCAGCG CCGAACTGGC CGCACGCTGG 
TATCCACATA TTACGGCGGT AATGAGCGAA TTCGGTATTA CTGCGCCACT GGATCAGGCC 
ATGTTTATTG CACAAGCGGG ACATGAATCA GCAGGATTTA CTGTTCTGAA GGAAAGCTTC 
AATTATTCAG TGGAGGCGCT GAAGAAGACG TTTGGTAAAC GCCTGACGCC GTATCAGTGT 
GAAATGCTGG AGCGTGTCGA TGGTAAGCAG GTGGCCCACC AGCCGCAAAT AGCAAATCTG 
GTTTACGGTA GCCGCATGGG TAACAAAGAC GCCGGAGATG GCTGGAAGTA TCGCGGGCGT 
GGGCTTATCC AGATTACCGG GCTGGAGAAT TACACCAGAT GCGGCGTTGC CCTGAAACTG 
GATCTGGTGG CGAATCCGGG ACAGCTTGAG CTGGATCGTC ATGCCGCCCG TTCCGCAGCG 
TGGTTTTTTG TGACTGGAGG GTGTCTGAAA TACTCCGGCG ACCTGGTACG CGTTACGCAG 
ATCATTAACG GAGGGCAGAA CGGCATCGGT GACAGGCGAG AGCGCTTTGA AAAAGCAAAA 
TCGGTGCTGG TATGA
 
Protein sequence
MNESQFQQAA GISAELAARW YPHITAVMSE FGITAPLDQA MFIAQAGHES AGFTVLKESF 
NYSVEALKKT FGKRLTPYQC EMLERVDGKQ VAHQPQIANL VYGSRMGNKD AGDGWKYRGR 
GLIQITGLEN YTRCGVALKL DLVANPGQLE LDRHAARSAA WFFVTGGCLK YSGDLVRVTQ 
IINGGQNGIG DRRERFEKAK SVLV