Gene SeD_A1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1085 
Symbol 
ID6872628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1088086 
End bp1088403 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content54% 
IMG OID642784270 
Productputative DNA-binding protein 
Protein accessionYP_002214944 
Protein GI198243801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.360029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0000752192 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTC TTGAGCGGAT TATCGGTCTG GTGAAAGAGC AGGGGCGCAT CACGACGAAC 
GACGTCGTTG CGATTTTTGG CGTGCACCGA ACCACGGCGG AGAAATATCT GCGTATCGCG 
CTGGAGCGAG GCGGCTTCAT TCGTCATGGC CGCTGCGGCA TTTTCCGAGA CCAGCGTGCG 
GTGATTGATT ATGACCTCAG GCGATACAGC AGTAGTCAGG TAACGGGATT TTCAGCGCTG 
CCGGTGCTGG AGAAAAGCCC GGTAATGCAG GTTTATGGAG CATCCAAAAT GAGCATCAAC 
AAGGGGGGAG CCCAATGA
 
Protein sequence
MIILERIIGL VKEQGRITTN DVVAIFGVHR TTAEKYLRIA LERGGFIRHG RCGIFRDQRA 
VIDYDLRRYS SSQVTGFSAL PVLEKSPVMQ VYGASKMSIN KGGAQ