Gene SeD_A1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1084 
Symbol 
ID6874212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1087296 
End bp1088045 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content53% 
IMG OID642784269 
Productputative replication protein 
Protein accessionYP_002214943 
Protein GI198243311 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.372508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0000157316 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAACG TAATCGGTAC TGGCAGTGCG CTTGATCGCC TGAAAAGAAT TATCCCAGCC 
AGTGTGCAGC CGAAATTCTC GACTGCTGAT GAGTGGCGGG CATGGCAGGA AGCCGAAGGG 
CGTAAACGCA GTGAAGAGCT TGACAGGATG AATCAGAAAT CCCGCACCGA GAAGATTTTC 
GGGCGATCTG GCATTCAGGA TCTCCATCGT AGCTGTACGT TTGCTAACTA CGAAGTAAGC 
GGGGAGGGGC AGCGAAAAGC GTACACGATG GCAAAAAGTT ATGCCCAGAA CTTCGGTAGT 
GGATTTGCGA GCTTTGTGTT CAGCGGTGGT CCGGGAACCG GGAAAAACCA TCTTGCGGCG 
GCAATCGGAA ATCATCTGCT GGCCGGCGGT CATAGCGTTC TGGTGGTAAC CATTCCTGAC 
CTGATGCTCA GGGTTCGTGA GTGCTACGAC GGTGGGCAAT CAGAAGCGTC CCTGCTTGAT 
GACCTTTGCA AAGTTGACCT GCTGGTACTG GATGAAGTCG GTATTCAGCG CGGGAGCAGT 
GGTGAGAAGG TCATTCTCAA TCAGGTTATC GATCGCCGTC TCTCATCGAT GCGACCTGTT 
GGCGTTCTGA CGAATCTTAA CCACGAGGGG CTGTTGGATT CACTGGGCGC GAGGGTTATC 
GATCGCCTCC AGATGGACGG AGGGATGTGG GTGAATTTTG ACTGGGAAAG CTACCGGAAA 
AACGTTAGCC ACCTCCGGAT TGTGAAATAA
 
Protein sequence
MKNVIGTGSA LDRLKRIIPA SVQPKFSTAD EWRAWQEAEG RKRSEELDRM NQKSRTEKIF 
GRSGIQDLHR SCTFANYEVS GEGQRKAYTM AKSYAQNFGS GFASFVFSGG PGTGKNHLAA 
AIGNHLLAGG HSVLVVTIPD LMLRVRECYD GGQSEASLLD DLCKVDLLVL DEVGIQRGSS 
GEKVILNQVI DRRLSSMRPV GVLTNLNHEG LLDSLGARVI DRLQMDGGMW VNFDWESYRK 
NVSHLRIVK