| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1073 |
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| Symbol | pncB |
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| ID | 6873531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1076790 |
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| End bp | 1077992 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642784258 |
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| Product | nicotinate phosphoribosyltransferase |
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| Protein accession | YP_002214932 |
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| Protein GI | 198243495 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.000104663 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAAT TCGCTTCTCC TGTTCTGCAC TCGTTGCTGG ATACAGATGC TTATAAGTTG
CATATGCAGC AAGCCGTTTT TCACCACTAC TATGATGTGC AGGTAGCGGC TGAGTTTCGT
TGCCGTGGCG ACGACCTGCT GGGTATTTAT GCCGATGCTA TTCGCGAGCA GGTGGACGCG
ATGCAGCACC TGCGCCTCCA GGAGGACGAG TTCCAGTGGC TCTCCGGCCT GCCCTTTTTT
AAACCGGATT ATCTGAACTG GTTACGCGAG TTTCGCTATA ACCCAGCTCA AGTCTGTGTC
ACCAACGATA ACGGCAAGCT GAATATTCGC TTAACCGGCC CGTGGCGTGA AGTCATTATG
TGGGAAGTGC CGCTGCTGGC CGTGATCAGT GAGCTGGTTC ATCACTACCG CTCGCCAAAC
GCGGGCGTTG ATCAGGCGCT CGACGCGCTG GAAAGTAAGC TGGTTGATTT CACTGCGTTA
ACCGCCAATC TCGATATGTC CCGCTTCCAC CTGATGGACT TCGGCACCCG CCGCCGTTTC
TCTCGTGAAG TGCAGCAGGC GATAGTTAAA CGTCTCCAGC AGGAGTCATG GTTCGTCGGC
ACCAGCAACT ATGATCTCGC GCGTCGCCTG GCGCTGACGC CGATGGGCAC TCAGGCGCAC
GAATGGTTCC AGGCGCATCA ACAAATCAGT CCGGACCTGG CGACCAGCCA GCGTGCCGCG
TTGGCCGCCT GGCTTAACGA ATATCCGGAC CAGCTTGGTA TCGCCTTGAC AGATTGCATT
ACAATGGATG CGTTTTTACG CGATTTCGGC ATTGAATTCG CCAGCCGTTA TCAGGGGTTA
CGCCACGACT CAGGAGACCC TGTCGCATGG GGCGAAAAGG CGATTGCCCA TTATGAAAAG
CTGGGGATTG ATCCGCTGAC AAAAACGCTG GTCTTTTCAG ATAACCTTGA TCTGCCAAAG
GCGGTCGAGC TCTATCGCCA TTTCGCCTCT CGCGTGCAGT TAAGCTTCGG CATCGGTACC
CGCCTGACCT GCGATATCCC TCAGGTAAAA CCGCTCAATA TCGTGATTAA GCTCGTGGAA
TGTAACGGAA AGCCGGTGGC TAAACTTTCC GACAGCCCCG GTAAAACGAT CTGTCATGAT
AAAGCGTTTG TGCGCGCGCT GCGTAAAGCG TTCGATCTCC CGCAGGTGCG TAAAGCAAGT
TAA
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| Protein sequence | MTQFASPVLH SLLDTDAYKL HMQQAVFHHY YDVQVAAEFR CRGDDLLGIY ADAIREQVDA
MQHLRLQEDE FQWLSGLPFF KPDYLNWLRE FRYNPAQVCV TNDNGKLNIR LTGPWREVIM
WEVPLLAVIS ELVHHYRSPN AGVDQALDAL ESKLVDFTAL TANLDMSRFH LMDFGTRRRF
SREVQQAIVK RLQQESWFVG TSNYDLARRL ALTPMGTQAH EWFQAHQQIS PDLATSQRAA
LAAWLNEYPD QLGIALTDCI TMDAFLRDFG IEFASRYQGL RHDSGDPVAW GEKAIAHYEK
LGIDPLTKTL VFSDNLDLPK AVELYRHFAS RVQLSFGIGT RLTCDIPQVK PLNIVIKLVE
CNGKPVAKLS DSPGKTICHD KAFVRALRKA FDLPQVRKAS
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