| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1064 |
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| Symbol | |
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| ID | 6871196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1069751 |
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| End bp | 1070842 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642784249 |
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| Product | outer membrane protein F |
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| Protein accession | YP_002214923 |
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| Protein GI | 198242146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.000219898 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAGC GCAAAATCCT GGCAGCGGTG ATCCCTGCCC TGCTGGCTGC TGCAACCGCA
AACGCAGCAG AAATTTATAA TAAAGATGGT AATAAGCTGG ATCTGTACGG TAAAGCCGTG
GGTCGTCACG TATGGACAAC GACCGGCGAT AGCAAAAATG CCGACCAGAC TTATGCCCAG
ATTGGTTTTA AAGGGGAAAC GCAGATTAAC ACCGATCTGA CCGGTTTCGG TCAGTGGGAA
TACCGTACTA AAGCAGACCG CGCTGAAGGC GAACAGCAGA ACTCGAATCT GGTCCGTCTG
GCCTTCGCGG GTTTGAAATA CGCGGAAGTG GGTTCAATCG ATTATGGTCG TAACTACGGT
ATCGTTTACG ATGTTGAATC CTATACCGAT ATGGCCCCCT ACTTCTCCGG CGAAACCTGG
GGCGGCGCCT ATACTGATAA CTACATGACC AGCCGTGCTG GCGGTTTGTT GACCTACCGT
AACTCTGACT TCTTTGGTCT GGTGGACGGT CTCTCTTTCG GTATCCAGTA TCAGGGTAAA
AATCAGGACA ACCACAGCAT TAACTCTCAG AATGGCGATG GCGTAGGTTA CACCATGGCA
TATGAGTTCG ACGGCTTTGG CGTCACCGCA GCGTACAGCA ACAGCAAGCG TACTAACGAT
CAGCAGGATC GCGATGGTAA TGGCGATCGC GCAGAATCAT GGGCCGTTGG CGCGAAATAT
GATGCAAACA ACGTCTACCT GGCTGCCGTA TATGCTGAAA CCCGCAATAT GAGCATTGTT
GAAAATACGG TTACCGATAC CGTGGAAATG GCAAACAAAA CGCAGAACCT GGAAGTGGTC
GCTCAGTACC AGTTTGACTT CGGCCTGCGT CCGGCAATCT CGTATGTGCA GAGTAAAGGT
AAGCAGTTGA ACGGCGCCGA CGGCTCGGCC GATCTGGCGA AATATATTCA GGCGGGCGCG
ACTTACTACT TCAACAAAAA CATGAACGTA TGGGTTGACT ACCGTTTCAA CCTGCTGGAC
GAAAACGACT ACAGCTCCAG CTACGTTGGC ACCGACGATC AGGCGGCTGT CGGTATTACT
TACCAGTTCT GA
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| Protein sequence | MMKRKILAAV IPALLAAATA NAAEIYNKDG NKLDLYGKAV GRHVWTTTGD SKNADQTYAQ
IGFKGETQIN TDLTGFGQWE YRTKADRAEG EQQNSNLVRL AFAGLKYAEV GSIDYGRNYG
IVYDVESYTD MAPYFSGETW GGAYTDNYMT SRAGGLLTYR NSDFFGLVDG LSFGIQYQGK
NQDNHSINSQ NGDGVGYTMA YEFDGFGVTA AYSNSKRTND QQDRDGNGDR AESWAVGAKY
DANNVYLAAV YAETRNMSIV ENTVTDTVEM ANKTQNLEVV AQYQFDFGLR PAISYVQSKG
KQLNGADGSA DLAKYIQAGA TYYFNKNMNV WVDYRFNLLD ENDYSSSYVG TDDQAAVGIT
YQF
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