Gene SeD_A1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1060 
Symbol 
ID6872604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1064981 
End bp1066831 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content57% 
IMG OID642784245 
Producthypothetical protein 
Protein accessionYP_002214919 
Protein GI198244692 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.2478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.00110354 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGCTTA ACAAGATGTG TGGTCGTTGT CTGTCGGCAA TCAGTTTATG CCTGGCCGTA 
ACATTCGCTC CACTGTTCAA TGCGCAGGCC GATGAGCCTG AAATGATACC TGGCGATAGC
GCCGTTGCCG CGCCGGATCT AGCTGGGCCG CAGAAGCAAT CAGCCGCGAC GGCGATTATG
GCCGGGATTC AGCCGCTGCC GGAGGGCGTT TCAGCCGAGA AAGTCCGGGC TGATTTACAG
TCGCAGCTTC CTTCCGGCTA TACGCCGGTC TATATGAGCC AGCTGACATT GCTGTATGCC
GCGCGCGACA TGAAGCCCAT GTGGGATAAT CGCGATGCGG TGAAAGTCTT CCAGCAACAG
TTGGCGGAGG TGGCGATTGC CGGATTCCAG CCGCAGTTTA CCGCCTGGGT GGCATTGTTG
ACCGATCCCG CCGTAAACGG TATGGCGCGC GATGTTGTGT TGTCAGACGC TATGATGGGC
TATCTCCATT TCATTGCGAA TATCCCCGTC AAAGGCCAGC GCTGGTTATA TAGCAACAAA
CCTTACGCAT TGGCGACGCC GCCAGTCTCG GTGATTAACC AGTGGCAAAT CGCGCTGGAA
GAGGGGCAGT TGCCGATGTT TGTCGCCAGC CTGGCGCCGC AGCATCCACA GTATGCGCCC
ATGCATGACG CGCTGCTGAA GCTGGTGGCG GACTCTCGCC CGTGGCCGCA GTTGGCCAAT
ACCGCAACGC TGCGCCCGGG GCAATGGAGT AACGATGTGC CTGCGCTGCG CGAAATATTA
CAGCGTACGG GGATGCTGGA TGGCGGTCCA AAGATAGCCT TACCCGGCGA TAACACTGCT
GATAGCGCCG TCGTCAGCCC CTCCGCCGTG GTCGACGAAC CATCGGTGGC GCAGCCGGTC
GACGAACAAA CGGCCCGCCG TAGTAAGCCG GCTCCGGCGG TACGCGCCGC CTACGATAAT
GAACTGGTCG AGGCGGTAAA GCGTTTTCAG GCATGGCAAG GGCTGGGGGC GGATGGCGTT
ATTGGCCCGG CGACGCGTAA CTGGCTTAAT ATGACCCCCG CGCAACGCGC AGGCGTACTG
GCACTGAATA TCCAACGTTT ACGCCTGCTG CCGGCGGAAC TCTCTACCGG TATTATGGTA
AACATTCCCG CTTATTCGCT GGTCTACTAT CAGAATGGCA ACCAGGTGCT GGCTTCGAGG
GTGATCGTCG GGCGTCCCGA TCGTAAAACG CCGATGATGA GCAGCGCGCT GAATAATGTG
GTGGTGAACC CGCCGTGGAA CGTTCCGCCC ACGCTTGCGC GTAAAGACAT TTTACCGAAG
GTGTGGAATG ACCCAGGCTA TCTGGAGCGC CATGGCTACA CCGTGATGCG CGGCTGGAAC
AGCAAAGAAG CGATCGATCC GTGGCAGGTT GACTGGACCA CCATTACGCC ATCGAATCTT
CCGTTCCGTT TCCAGCAGGC GCCAGGCGCG CACAATTCGC TGGGGCGTTA TAAATTTAAT
ATGCCGAGCT CTGATGCGAT CTATCTGCAC GATACGCCTA ACCATACTCT CTTTCAGCGT
GACGCCAGGG CGTTAAGTTC CGGCTGCGTG CGGGTCAATA AGGCCTCTGA ACTGGCGAAT
ATGCTCTTGC AGGATGCTGG CTGGAACGAT GCGCGGATCT CAGGCGCCCT GAAGCAAGGC
GACACGCGGT ATGTCAATAT CCGGCAGAAC ATTCCAGTAA ATCTTTACTA TCTGACCGCG
TTTGTCGGCG CAGATGGACG TATGCAATAT CGTACAGATA TTTACAATTA CGATCTCACA
GCGCGATCCA GCGCACAAAT TGTGCCAAAG GTTGAACAAT TAATCAGGTA A
 
Protein sequence
MLLNKMCGRC LSAISLCLAV TFAPLFNAQA DEPEMIPGDS AVAAPDLAGP QKQSAATAIM 
AGIQPLPEGV SAEKVRADLQ SQLPSGYTPV YMSQLTLLYA ARDMKPMWDN RDAVKVFQQQ
LAEVAIAGFQ PQFTAWVALL TDPAVNGMAR DVVLSDAMMG YLHFIANIPV KGQRWLYSNK
PYALATPPVS VINQWQIALE EGQLPMFVAS LAPQHPQYAP MHDALLKLVA DSRPWPQLAN
TATLRPGQWS NDVPALREIL QRTGMLDGGP KIALPGDNTA DSAVVSPSAV VDEPSVAQPV
DEQTARRSKP APAVRAAYDN ELVEAVKRFQ AWQGLGADGV IGPATRNWLN MTPAQRAGVL
ALNIQRLRLL PAELSTGIMV NIPAYSLVYY QNGNQVLASR VIVGRPDRKT PMMSSALNNV
VVNPPWNVPP TLARKDILPK VWNDPGYLER HGYTVMRGWN SKEAIDPWQV DWTTITPSNL
PFRFQQAPGA HNSLGRYKFN MPSSDAIYLH DTPNHTLFQR DARALSSGCV RVNKASELAN
MLLQDAGWND ARISGALKQG DTRYVNIRQN IPVNLYYLTA FVGADGRMQY RTDIYNYDLT
ARSSAQIVPK VEQLIR