Gene SeD_A1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1056 
SymbolsmtA 
ID6874705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1057379 
End bp1058182 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content55% 
IMG OID642784241 
Productputative metallothionein SmtA 
Protein accessionYP_002214915 
Protein GI198246189 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0602785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATC GCAATTTTGA TGACATTGCT GAAAAGTTTT CCCGTAACAT TTACGGCACG 
ACCAAAGGAC AACTGCGGCA AGCCATTCTG TGGCAAGACC TGGATCGCGT GCTGGAGGAG
ATTGGCGGGC GGAAACTGCG GGTGCTGGAT GCCGGCGGCG GCGAAGGGCA AACGGCGATT
AAGATGGCGG AACGCGGCCA TCAGGTGACG TTATGCGATC TGTCTGGCGA AATGATCGCC
CGCGCGCGGC AGGCGGCCGA GGCAAAAGGT GTGAGCAAAG ACATGCATTT TATACAATGC
CCGGCTCAGG ACGTCGCTTC GCATTTGGAA AGCCCGGTTG ATCTGATATT GTTTCATGCT
GTGCTGGAGT GGGTAGCCGA TCCTGTCGGC GTATTAGAAA CGCTCTGGTC AGTATTGCGC
CCTGGCGGCG CGCTGTCGTT GATGTTCTAT AACGCTAACG GTTTGCTGAT GCACAATATG
GTGGCGGGTA ATTTTGACTA CGTGCAGGCG GGGATGCCTA AACGCAAGAA GCGCACGCTG
TCGCCTGACT ACCCGCGCGA CCCCGCGCAG GTGTACCAGT GGCTGGAGGC GATTGGTTGG
CAGATTACCG GTAAAACCGG CGTGCGTGTG TTTCATGATT ATCTGCGTGA AAAACACCAG
CAGCGTGACT GTTATGAGAC CCTGGTCGAA CTGGAAACGC GTTATTGCCG CCAGGAGCCG
TATATTAGCC TTGGGCGCTA CATTCATGTC ACCGCGATTA AAAGCCCGGC GCTAGCCGCA
GATGCAAGGA TAACCTATGA GTGA
 
Protein sequence
MQDRNFDDIA EKFSRNIYGT TKGQLRQAIL WQDLDRVLEE IGGRKLRVLD AGGGEGQTAI 
KMAERGHQVT LCDLSGEMIA RARQAAEAKG VSKDMHFIQC PAQDVASHLE SPVDLILFHA
VLEWVADPVG VLETLWSVLR PGGALSLMFY NANGLLMHNM VAGNFDYVQA GMPKRKKRTL
SPDYPRDPAQ VYQWLEAIGW QITGKTGVRV FHDYLREKHQ QRDCYETLVE LETRYCRQEP
YISLGRYIHV TAIKSPALAA DARITYE