| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1050 |
|---|
| Symbol | lpxK |
|---|
| ID | 6874177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 1052153 |
|---|
| End bp | 1053130 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642784235 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_002214909 |
|---|
| Protein GI | 198245269 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 0.212598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGC GTATCTGGTC GGGTGAATCC CCGCTATGGC GGTTACTGCT GCCGCTCTCC
TGGCTGTATG GCCTGGTGAG CGGGGCGATT CGTCTGAGCT ATAAGCTTGG TTTGAAACGC
GCCTGGCGAG CGCCGGTACC GGTGGTTGTG GTAGGGAATC TTACGGCTGG CGGTAACGGT
AAAACCCCCG TAGTCATTTG GCTGGTGGAA AAGCTGCAAC AGCGTGGCGT GCGCGTGGGG
GTCGTTTCCC GCGGCTACGG CGGGAAAGCT GCCGCTTATC CGCTGCTCCT GACGCCGGAG
ACGACAACCG CAGAAGCGGG AGATGAACCG GTATTGATTT ATCAACGGAC CGGCGCGCCT
GTCGCGGTGG CGCCTGAACG CGCCGCGGCG GTGAAAGCGA TTCTGGCGGC GCATAATGTG
CAGATTATTA TCACCGACGA TGGGTTGCAG CATTACCGAC TAGCGCGAGA TATTGAAATT
GTGGTGATTG ACGGGGTGCG CCGTTTTGGC AACGGCTGGT GGCTTCCTGC CGGCCCTATG
CGCGAACGCG CCAGTCGCCT GAAAACCGTG GACGCCGCTA TCGTGAATGG CGGCGTCGCC
CGGGCGGGTG AAATACCCAT GCAGCTAGCG CCTGGACTGG CGGTGAACTT ACGTACGGGA
GCGCGTTGCG ATGTGGCGCA ACTGAGCAAT ATTGTGGCGA TGGCGGGCAT CGGTCATCCG
CCGCGCTTTT TCGCGACGCT GGAAGCCTGT GGCGCGCATC CGCAAAAGTG CGTCCCGCTG
GCCGATCATC AAACGCTCGC CCCTGCTGAC GTTCAGGCGT TGGTCGGTGA AGGGCAGACC
CTGGTAATGA CGGAAAAAGA CGCGGTGAAA TGCCGTGCTT TTGCCGAAGA TAACTGGTGG
TTCTTACCGG TTGATGCGCG TTTGTCCGGT GAGCAGCCTG ATAAGTTGCT TCAACATATC
ACCTCGCTGG TTCGCTAG
|
|---|
| Protein sequence | MIARIWSGES PLWRLLLPLS WLYGLVSGAI RLSYKLGLKR AWRAPVPVVV VGNLTAGGNG
KTPVVIWLVE KLQQRGVRVG VVSRGYGGKA AAYPLLLTPE TTTAEAGDEP VLIYQRTGAP
VAVAPERAAA VKAILAAHNV QIIITDDGLQ HYRLARDIEI VVIDGVRRFG NGWWLPAGPM
RERASRLKTV DAAIVNGGVA RAGEIPMQLA PGLAVNLRTG ARCDVAQLSN IVAMAGIGHP
PRFFATLEAC GAHPQKCVPL ADHQTLAPAD VQALVGEGQT LVMTEKDAVK CRAFAEDNWW
FLPVDARLSG EQPDKLLQHI TSLVR
|
|---|
| |