Gene SeD_A1031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1031 
SymboldmsC1 
ID6875235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1028368 
End bp1029231 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content58% 
IMG OID642784216 
Productanaerobic dimethyl sulfoxide reductase subunit C 
Protein accessionYP_002214890 
Protein GI198245201 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGTG GATGGCATGA ATGGCCGTTG ATGATCTTCA CGGTCTTTGG TCAGTGCGTG 
GCCGGTGGTT TTATTGTTCT GGCTTTGGCG CTGATGAAGG GCGACCTGCG CGCGGAAACG
CAGCAGCGGG TGATCGCCTG TATGTTTGGT CTGTGGGTGC TGATGGGGAT TGGCTTTATC
GCCTCGATGC TGCATCTGGG CTCGCCGATG CGCGCGTTTA ACTCGCTTAA CCGCGTGGGT
GCTTCCGCAC TGAGCAATGA AATTGCCAGC GGCTCGGTGT TTTTTGCGGT CGGCGGGATT
GGCTGGCTGC TGGCGGTACT GAAAAAGCTG CCGCCGGCAC TGCGCACACT CTGGCTGATT
ATCACGATGG TACTGGGCGT CGTCTTCGTC TGGATGATGG TACGCGTCTA TAACAGCATC
GATACAGTAC CGACCTGGTA TAGCGTCTGG ACGCCGCTGG GCTTCTTCCT GACGCTCTTT
ATAGGGGGCC CGCTACTGGG TTATCTGCTG CTGCGCATCG CAGGCGTGAA CGGTTGGGCG
ATGCGTTTGT TGCCTGCGGT GTCGGTGCTG GCGCTGGTGG TTATTGCCAT TATGGTGGCC
ATGCAGGGCG CGGAACTGGC GACGATTCAC AGTTCCATTC AGCAGGCGTC TGCTCTGGTG
CCGGATTATG GTTCGCTGAT GGCCTGGCGT ATGGTGCTGC TTGCGGCGGC GTTGTGCTGC
TGGATTGTGC CACAGTTAAA AGGGTATCAA CCTGCGGTAC CGTTGCTCTC TGTCGCCTTC
ATTCTGATGC TGGCGGGGGA ATTGATTGGC CGCGGCGTAT TCTATGGGCT GCATATGACC
GTGGGCATGG CGGTAGCCAG CTAA
 
Protein sequence
MGSGWHEWPL MIFTVFGQCV AGGFIVLALA LMKGDLRAET QQRVIACMFG LWVLMGIGFI 
ASMLHLGSPM RAFNSLNRVG ASALSNEIAS GSVFFAVGGI GWLLAVLKKL PPALRTLWLI
ITMVLGVVFV WMMVRVYNSI DTVPTWYSVW TPLGFFLTLF IGGPLLGYLL LRIAGVNGWA
MRLLPAVSVL ALVVIAIMVA MQGAELATIH SSIQQASALV PDYGSLMAWR MVLLAAALCC
WIVPQLKGYQ PAVPLLSVAF ILMLAGELIG RGVFYGLHMT VGMAVAS