Gene SeD_A1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1030 
SymboldmsB_1 
ID6873667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1027749 
End bp1028366 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content57% 
IMG OID642784215 
Productanaerobic dimethyl sulfoxide reductase subunit B 
Protein accessionYP_002214889 
Protein GI198245763 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCC AGTATGGATT TTTTATTGAT TCCAGCCGTT GCACCGGTTG CAAAACCTGC 
GAACTGGCCT GCAAGGACTA CAAAGATTTG ACCCCGGATG TCAGCTTCCG TCGCATTTAT
GAGTATGCAG GTGGCGACTG GCAGGAGGAT AACGGCGTCT GGCACCAGAA CGTCTTTGCC
TACTATCTCT CCATCTCCTG TAACCACTGC GAAGACCCGG CCTGCACCAA AGTCTGCCCG
AGCGGCGCGA TGCACAAGCG CGATGACGGT TTTGTGGTGG TGAACGAAGA GGTCTGTATC
GGTTGCCGCT ACTGCCACAT GGCCTGCCCG TACGGCGCGC CGCAGTACAA CGCGGCCAAA
GGTCATATGA CCAAGTGCGA TGGCTGTTAT GACCGGGTGG CGGAAGGTAA GAAACCGATC
TGCGTCGAAT CCTGTCCGCT GCGGGCGCTG GATTTCGGCC CGATAGACGA ACTGCGCAAA
AAACACGGTG AGCTGGCTGC CGTCGCGCCG TTACCGCGCG CGCATTTCAC GAAGCCGAAT
ATTGTGATTA AACCCAACGC CAACAGCCGC CCGACCGGGG ACACTACCGG TTATCTGGCC
AATCCGAAGG AGGTATAA
 
Protein sequence
MTTQYGFFID SSRCTGCKTC ELACKDYKDL TPDVSFRRIY EYAGGDWQED NGVWHQNVFA 
YYLSISCNHC EDPACTKVCP SGAMHKRDDG FVVVNEEVCI GCRYCHMACP YGAPQYNAAK
GHMTKCDGCY DRVAEGKKPI CVESCPLRAL DFGPIDELRK KHGELAAVAP LPRAHFTKPN
IVIKPNANSR PTGDTTGYLA NPKEV