Gene SeD_A1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1020 
Symbolaat 
ID6872295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1010940 
End bp1011644 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content56% 
IMG OID642784205 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_002214879 
Protein GI198245408 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.379289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGG TTCAGCTTTC CCGACATTCT ATCGCCTTCC CTTCGCCGGA AGGCGCTTTA 
CGCGAGCCTA ACGGTTTACT GGCGCTGGGC GGCGATCTCA GCCCTGCCCG GTTGTTAATG
GCCTATCAGC ACGGGATTTT CCCGTGGTTT TCGCCGGGCG ACCCGATTCT GTGGTGGTCG
CCCGATCCGC GCGCCGTGCT GTGGCCTGAA AAGTTTCACC TCAGTCGCAG CATGAAGCGC
TTTCACAACG CATCCCCTTA CCGCGTGACG CTCAATTACG CTTTCGACCG GGTCATTGAT
GGATGCGCCA ATCACCGTGA CGAAGGCACC TGGATAACGC GTGGTATTGA GGAAGCCTAT
CGCCGATTAC ATGAATTGGG CCACGCGCAC TCCATTGAAG TGTGGCGCGA TCGGGAACTG
GTCGGCGGGA TATATGGCGT CTCGCAGGGG GCGCTATTTT GCGGCGAATC GATGTTTAGC
CGCCAGGAGA ATGCCTCTAA AACCGCACTG CTGGTTTTTT GCGCTGAATT TATCCGTCAC
GGCGGTAAAC TTATTGATTG TCAGGTACTT AATAATCATA CCGCCTCGCT CGGCGCCATT
GAAATTCTAC GTCGTGACTA CCTCGATCAC CTCGCGGCCT TACGCCAACA GCCGCTGGCC
TCCCGTTTTT GGGTGCCGCG GACATTATTT TTGCCCCGGA AGTGA
 
Protein sequence
MRLVQLSRHS IAFPSPEGAL REPNGLLALG GDLSPARLLM AYQHGIFPWF SPGDPILWWS 
PDPRAVLWPE KFHLSRSMKR FHNASPYRVT LNYAFDRVID GCANHRDEGT WITRGIEEAY
RRLHELGHAH SIEVWRDREL VGGIYGVSQG ALFCGESMFS RQENASKTAL LVFCAEFIRH
GGKLIDCQVL NNHTASLGAI EILRRDYLDH LAALRQQPLA SRFWVPRTLF LPRK