Gene SeD_A1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1016 
Symbol 
ID6875882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1007742 
End bp1008419 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID642784201 
Producthypothetical protein 
Protein accessionYP_002214875 
Protein GI198245014 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGTC CTGCTAATTT TAATGGTTTG CGCCCGGTAA TTGATGTTAA CGATTCCGTG 
ATGCTTTTAA TCGATCATCA AAGCGGTCTT TTCCAGACCG TAGGCGATAT GCCAATGCCG
GAATTACGCG CTCGCGCCGC GGCGTTGGCG AAGATGGCGA CGTTAGCGAA AATGCCGGTC
ATTACCACGG CATCCGTACC GCAAGGTCCG AACGGCCCGC TGATCCCGGA GATCCACGCT
AATGCGCCAC ATGCGCAGTA CATTGCGCGT AAAGGTGAAA TTAACGCCTG GGATAACGAA
GATTTCGTTA AGGCGGTAAA AGCGACGGGT CGTAAGACGC TGATCATTGC CGGGACGATT
ACCAGCGTGT GCATGGCATT CCCGGCCATT AGCGCGGTAG CGGAAGGTTA TAAGGTATTT
GCCGTGATCG ACGCATCCGG TACCTACAGT AAGATGGCGC AGGAGATCAC CCTGGCGCGT
ATCGTACAGG CTGGCGTCGT ACCGATGGAT ACTGCCGCAG TCGCCTCTGA GCTGCAAGGC
ACCTGGAACC GTGAAGACGC CGCCGCGTGG GCCGACGTTT ATACTCAGGT ATTCCCGGCC
TATCAACTGC TGATAGAAAG CTACAGCAAA GCGCAGGATG TGGTGAAAAA CAACGAAATG
TTGGATTCAC AGCGCTAA
 
Protein sequence
MSSPANFNGL RPVIDVNDSV MLLIDHQSGL FQTVGDMPMP ELRARAAALA KMATLAKMPV 
ITTASVPQGP NGPLIPEIHA NAPHAQYIAR KGEINAWDNE DFVKAVKATG RKTLIIAGTI
TSVCMAFPAI SAVAEGYKVF AVIDASGTYS KMAQEITLAR IVQAGVVPMD TAAVASELQG
TWNREDAAAW ADVYTQVFPA YQLLIESYSK AQDVVKNNEM LDSQR