Gene SeD_A1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1007 
Symbol 
ID6871599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp998926 
End bp999876 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content47% 
IMG OID642784192 
Producthypothetical protein 
Protein accessionYP_002214867 
Protein GI198241910 
COG category[S] Function unknown 
COG ID[COG2990] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.690632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC TTACAGATAA TACCTGGTAC ACTTCAGATT ACATCTCTCC TTTACAATTA 
TTTATTCGTC TGACGCGCGG GCAATTACAG CCAGGAAAAT TCTGGCGTAA AGCCAGCTTT 
CGTCGCAAGT TTTTAATCCG CTCATTAGTC ATGCCGCGTG CGACCAGCCA ATTACTGACC 
AATCTCACCC AATGGCCGGA GTTAAATACG TTACTTGCTC GTCAGCCGCG TTTGCCTATT 
CGGCTACATC GTCCTTATAT GGCTGTAAAT ATTAAACGCG ATTTCGCCTT AGATGCGCTG 
TGTTTTCATT ATCAACAGAT GCGCCAACTT TTATCGCGGG AACAACAAGT TAGCTATTTA 
AGTCAGTATG GCCTGAATCT TGCTAAATTT GAAACTAAAA CCGGCGAGTT GTTTCAACTT 
GATTTAGTCA GTCTGGTCTC ACTGGATAAA GAAGGTGAAA GCACTATTGT TGTTCGCGAC 
GCACAGTTAC GTATTCTGGC AGAGATCACA TTTACCCTGT GTCGCTTTAA CCAACAACGC 
ACACTATTTA TCGGCGGATT ACAGGGCGCG GCAAACGACG TCCCTCACGA AATTATCCAG 
CAGGCGACCA AAGCCTGCCA TGGTCTTTTT CCCAAACGCA TCGTGATGGA GGCTCTCTGT 
CAGTTTGCGC AAGTCTTTCA GGCAGAAAAG ATTATAGCCG TGAGTAACGA TGCGCACGTT 
TACCGTAGCT GGCGATACAT GGATAAAAAG ACGCAAATGC ATGCCGACTA TGACGCGTTT 
TGGGAATCGT TAGGCGGTGA AAGAATTAAA GGAAATTACT ATGCGCTGCC GCTGGCGATC 
GCCCGAAAAA GCGAAGCGGA GATCGCCAGT AAAAAACGGG CCGAGTATCG CCGCCGCTAT 
GCGTTACTCG ATAGCGTCGT CGAACAGGTT CCGGCCACAT TCAAACGTTA A
 
Protein sequence
MTQLTDNTWY TSDYISPLQL FIRLTRGQLQ PGKFWRKASF RRKFLIRSLV MPRATSQLLT 
NLTQWPELNT LLARQPRLPI RLHRPYMAVN IKRDFALDAL CFHYQQMRQL LSREQQVSYL 
SQYGLNLAKF ETKTGELFQL DLVSLVSLDK EGESTIVVRD AQLRILAEIT FTLCRFNQQR 
TLFIGGLQGA ANDVPHEIIQ QATKACHGLF PKRIVMEALC QFAQVFQAEK IIAVSNDAHV 
YRSWRYMDKK TQMHADYDAF WESLGGERIK GNYYALPLAI ARKSEAEIAS KKRAEYRRRY 
ALLDSVVEQV PATFKR