Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1004 |
Symbol | hcp |
ID | 6875070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 994374 |
End bp | 996026 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642784189 |
Product | hydroxylamine reductase |
Protein accession | YP_002214864 |
Protein GI | 198245246 |
COG category | [C] Energy production and conversion |
COG ID | [COG1151] 6Fe-6S prismane cluster-containing protein |
TIGRFAM ID | [TIGR01703] hydroxylamine reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.97662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTGTG TGCAATGTGA ACAAACCATC CGTACACCAG CCGGAAACGG CTGCTCCTAC GCGCAGGGAA TGTGCGGTAA AACAGCTGAA ACGTCCGATC TGCAGGATCT GCTGATTGCG GCTTTGCAAG GTTTGTCTGC CTGGGCGGTG AAGGCCCGTG AATATGGCAT CATTAATCAC GACGTTGATA ACTTTGCGCC GCGCGCGTTT TTCTCCACGC TGACCAACGT TAACTTCGAC TCTCCGCGTA TCGTCGGCTA CGCCCGTGAA GCGATTGCCT TGCGTGAAGC GTTGAAAGCG CAGTGCCTGA GCGTGGATGC CAATGCGCAT TGCGACAATC CGATGGCCGA TCTGCAACTG GTTAGCGACG ATCTGGGCGA ACTGCAACGT CAGGCGGCGG AATTTACCCC GAATAAAGAC AAAGCCGCCA TTGGCGAGAA CATCCTCGGC CTGCGTCTGC TGTGCCTGTA CGGTCTGAAA GGCGCGGCGG CGTATATGGA ACACGCGCAC GTTCTCGGTC AATACGACAA CGACATTTAC GCGCAGTACC ACAAAATCAT GGCCTGGCTG GGCACCTGGC CTGCTGACAT GAACGCGCTG CTGGAGTGCG CAATGGAAAT CGGCCAGATG AACTTCAAAG TGATGAGCAT TCTGGATGCC GGTGAAACCA CCAAATACGG TCACCCAACG CCGACTCAGG TCAACGTCAA AGCGACTGAA GGCAAGTGCA TTCTGATCTC CGGTCACGAT CTGAAAGATC TCTACAACCT GCTGGAGCAG ACCGAAGGCA CCGGCGTTAA CGTCTACACT CACGGTGAAA TGCTGCCCGC ACATGGCTAT CCGGAACTGC GTAAATTCAA GCATCTGGTC GGTAACTACG GCAGCGGCTG GCAGAATCAG CAGGTCGAAT TCGCCCGCTT CCCTGGCCCA ATCGTGATGA CCTCTAACTG CATTATCGAC CCGACCGTAG GCAGCTATGA CGACCGTATC TGGACCCGTA GCATCGTCGG CTGGCCGGGC GTTAGCCATC TTGAAGGCGA TGACTTCGGG CCGGTCATTG CCCAGGCGCA GCAAATGGCG GGCTTCCCGT ATAGCGAAAT TCCGCATCTC ATCACCGTCG GTTTTGGCCG TCAGACCCTG CTCGGCACTG CCGATACGCT CATCGATCTG GTCAGCCGTG AAAAACTGCG CCACATCTTC CTGGTCGGCG GCTGTGACGG CGCGCGCGGC GAGCGTAACT ACTTTACCGA TTTCGCCACC AGCGTACCGG ATGACTGCCT GATCCTGACC CTGGCGTGCG GTAAATACCG TTTCAACAAA CTGGAGTTCG GCGACATCGA AGGGCTGCCG CGTCTGGTCG ATGCCGGTCA GTGTAATGAT GCTTACTCCG CGATTATCCT GGCGGTGACG CTGGCGGAAA AACTGGGCTG CGGCGTCAAC GATCTGCCGC TATCGCTGGT GCTCTCCTGG TTTGAGCAGA AAGCGATCGT GATTCTGCTG ACGCTGCTGT CATTAGGCGT GAAAAATATT GTCACCGGGC CGACCGCGCC GGGCTTCTTC ACGCCGGATC TGCTGGCTAT CCTCAACGAG AAGTTCGGCC TGCGCTCCGT GACCACCGTT GAAGAAGACA TGAAGCAATT GCTGAGCGCG TAA
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Protein sequence | MFCVQCEQTI RTPAGNGCSY AQGMCGKTAE TSDLQDLLIA ALQGLSAWAV KAREYGIINH DVDNFAPRAF FSTLTNVNFD SPRIVGYARE AIALREALKA QCLSVDANAH CDNPMADLQL VSDDLGELQR QAAEFTPNKD KAAIGENILG LRLLCLYGLK GAAAYMEHAH VLGQYDNDIY AQYHKIMAWL GTWPADMNAL LECAMEIGQM NFKVMSILDA GETTKYGHPT PTQVNVKATE GKCILISGHD LKDLYNLLEQ TEGTGVNVYT HGEMLPAHGY PELRKFKHLV GNYGSGWQNQ QVEFARFPGP IVMTSNCIID PTVGSYDDRI WTRSIVGWPG VSHLEGDDFG PVIAQAQQMA GFPYSEIPHL ITVGFGRQTL LGTADTLIDL VSREKLRHIF LVGGCDGARG ERNYFTDFAT SVPDDCLILT LACGKYRFNK LEFGDIEGLP RLVDAGQCND AYSAIILAVT LAEKLGCGVN DLPLSLVLSW FEQKAIVILL TLLSLGVKNI VTGPTAPGFF TPDLLAILNE KFGLRSVTTV EEDMKQLLSA
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