Gene SeD_A0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0983 
SymbolpotG 
ID6875187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp973720 
End bp974853 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content54% 
IMG OID642784168 
Productputrescine transporter ATP-binding subunit 
Protein accessionYP_002214843 
Protein GI198245629 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.244699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGATG TCCCCCACCG CCCGCAGGTG AAAACCCGTA AAGCGCTGAC GCCGCTTCTG 
GAAATTCGCA ACCTGACGAA GTCATTCGAC GGGCAACATG CTGTCGATGA TGTCAGTCTG
ACTATCTATA AAGGCGAGAT TTTTGCCCTG CTGGGCGCGT CAGGTTGTGG AAAATCGACT
CTGCTACGGA TGCTGGCAGG TTTTGAACCG CCGAGCAGCG GGCAAATTAT GCTCGACGGC
GTCGATCTGG CGCATGTTCC GCCGTATCAG CGTCCGATTA ATATGATGTT TCAGTCCTAT
GCGTTGTTTC CGCATATGAC GGTAGAGCAG AACATCGCTT TTGGTCTGAA GCAGGACAAA
CTGCCGAAGG CGGAGATTAC CAGCCGCGTC AATGAGATGC TGGGTCCGGT GCACATGCAG
GAGTTTGCAA AACGTAAGCC GCATCAGCTT TCCGGCGGTC AGCGCCAGCG CGTGGCCCTG
GCGCGCAGCC TGGCGAAACG TCCTAAGCTG CTCTTGTTGG ATGAACCGAT GGGCGCGCTG
GATAAAAAAT TACGCGACCG GATGCAGCTT GAAGTGGTGG ATATCCTTGA GCGCGTCGGC
GTGACCTGCG TCATGGTGAC GCACGATCAG GAAGAAGCGA TGACGATGGC GGGGCGCATT
GCCATCATGA ACCGTGGAAA ATTTGTGCAA ATTGGCGAAC CGGAGGAGAT TTACGAGCAT
CCGACAACCC GCTATAGCGC CGAATTTATC GGATCGGTAA ATGTTTTTGA GGGCTTACTG
AAAGCGCGTG AAGAGGACGG TCTGGTCATT GACGCGCCCG GTTTGGTTCA TCCGTTAAAA
GTCGATGCAG ATGCCTCTGT CGTTGATAAT GTGCCGGTAT ATGTGGCGCT ACGTCCGGAA
AAAATCATTC TGTGTGAGTC GCCGCCTGCC GATGGCTATA ATTTCGCCGT CGGCGAAGTG
GCGCATATTG CGTATCTCGG CGATCTGTCT ATTTATCATG TGCGGCTAAA AAGCGGGCAG
ATGATCAGCG CTCAACTGCA GAATGCGCAC CGTTACCGGA AAGGGTTACC GACCTGGGGC
GATGAAGTGC GTTTGTGCTG GGAAGCGGAT AGCTGCGTGG TCCTGACGGT ATAA
 
Protein sequence
MNDVPHRPQV KTRKALTPLL EIRNLTKSFD GQHAVDDVSL TIYKGEIFAL LGASGCGKST 
LLRMLAGFEP PSSGQIMLDG VDLAHVPPYQ RPINMMFQSY ALFPHMTVEQ NIAFGLKQDK
LPKAEITSRV NEMLGPVHMQ EFAKRKPHQL SGGQRQRVAL ARSLAKRPKL LLLDEPMGAL
DKKLRDRMQL EVVDILERVG VTCVMVTHDQ EEAMTMAGRI AIMNRGKFVQ IGEPEEIYEH
PTTRYSAEFI GSVNVFEGLL KAREEDGLVI DAPGLVHPLK VDADASVVDN VPVYVALRPE
KIILCESPPA DGYNFAVGEV AHIAYLGDLS IYHVRLKSGQ MISAQLQNAH RYRKGLPTWG
DEVRLCWEAD SCVVLTV