Gene SeD_A0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0975 
Symbol 
ID6875785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp966845 
End bp968530 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content54% 
IMG OID642784160 
Producthypothetical protein 
Protein accessionYP_002214835 
Protein GI198242504 
COG category[R] General function prediction only 
COG ID[COG2985] Predicted permease 
TIGRFAM ID[TIGR01625] AspT/YidE/YbjL antiporter duplication domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATAA ACGTCGCAGA TTTGTTAAAT GGGAATTACA TCCTGTTATT ATTTGTGGTC 
CTGGCTCTTG GCCTGTGTCT TGGCAAGTTA CGTCTGGGTT CAGTCCAACT TGGTAATTCC
ATTGGCGTTT TAGTGGTCTC TCTATTATTA GGGCAGCAAC ACTTCAGTAT TAACACCGAC
GCGCTAAATC TGGGATTTAT GCTGTTTATT TTTTGTGTCG GCGTCGAGGC TGGCCCCAAC
TTTTTTTCGA TTTTTTTTCG CGACGGTAAA AATTATCTGA TGCTTGCCCT GGTCATGGTC
GGTAGCGCTC TGCTAATCGC CTTAGGCCTT GGTAAGCTAT TCGGCTGGGA TATCGGCCTG
ACGGTCGGTA TGCTGGCTGG CTCAATGACC TCCACGCCCG TGCTGGTTGG CGCAGGCGAT
ACCCTGCGAC ATTCCGGCAT CGCCAGCACG CAACTCTCCT CCGCTCTTGA TAATCTGAGC
CTGGGCTATG CCCTGACCTA TCTGATTGGG TTGGTCAGTC TGATCGTGGG CGCGCGCTAC
TTGCCTAAAC TACAGCATCA GGATTTGCAA ACCAGCGCCC AGCAAATTGC TCGCGAGCGC
GGTCTGGATA CCGATGCTAA TCGCAAGGTT TATTTGCCGG TTATCCGCGC CTATCGGGTT
GGCCCGGAAC TGGTGGCCTG GACTGACGGC AAAAACCTGC GCGAGCTGGG TATTTACCGC
CAGACAGGCT GCTATATCGA ACGTATTCGC CGTAACGGTA TTCTGGCGAA CCCGGATGGC
GATGCGGTGC TGCAAATGGG CGATGAGATT GCGCTGGTCG GCTATCCGGA CGCGCACGCC
AGGCTCGATC CCAGCTTCCG TAATGGTAAG GAAGTGTTTG ATCGCGATCT GCTTGATATG
CGCATCGTGA CGGAAGAAAT TGTGGTGAAA AACCACAATG CGGTCGGTCG CCGCCTCGCT
CAGCTCAAGC TGACCGATCA TGGCTGCTTC CTTAACCGCG TCATCCGCAG CCAGATCGAA
ATGCCTATCG ACGATAACGT CGTGCTGAAT AAAGGCGACG TTTTACAGGT GAGCGGCGAC
GCCAGACGCG TAAAAACCAT CGCCGATCGC ATTGGTTTTA TTTCGATCCA TAGTCAGGTG
ACGGACCTGC TCGCCTTCTG CGCTTTTTTT ATCATCGGGT TAATGATCGG GATGATTACC
TTCCAGTTCA GCAATTTTAG TTTCGGCATC GGCAACGCGG CCGGATTGTT GTTCGCCGGG
ATCATGCTCG GTTTCCTGCG CGCTAACCAT CCTACCTTTG GTTATATTCC GCAGGGCGCG
CTTAATATGG TGAAAGAATT CGGCTTGATG GTGTTTATGG CAGGCGTTGG TTTAAGCGCC
GGCAGCGGTA TCAGCAACGG TCTGGGCGCG GTCGGCGGAC AAATGCTGAT CGCCGGGCTT
GTCGTCAGCC TGGTACCGGT GGTGATCTGC TTCTTGTTTG GCGCTTATGT GCTGCGCATG
AACCGGGCGC TGCTGTTCGG TGCCATGATG GGCGCGCGTA CCTGCGCCCC GGCGATGGAA
ATCATTAGCG ATACGGCGCG CAGTAATATT CCAGCGCTGG GTTATGCGGG GACTTACGCC
ATCGCCAACG TTCTGCTAAC GCTGGCGGGG ACGCTTATTG TCATCATCTG GCCGGGGTTA
GGATAA
 
Protein sequence
MNINVADLLN GNYILLLFVV LALGLCLGKL RLGSVQLGNS IGVLVVSLLL GQQHFSINTD 
ALNLGFMLFI FCVGVEAGPN FFSIFFRDGK NYLMLALVMV GSALLIALGL GKLFGWDIGL
TVGMLAGSMT STPVLVGAGD TLRHSGIAST QLSSALDNLS LGYALTYLIG LVSLIVGARY
LPKLQHQDLQ TSAQQIARER GLDTDANRKV YLPVIRAYRV GPELVAWTDG KNLRELGIYR
QTGCYIERIR RNGILANPDG DAVLQMGDEI ALVGYPDAHA RLDPSFRNGK EVFDRDLLDM
RIVTEEIVVK NHNAVGRRLA QLKLTDHGCF LNRVIRSQIE MPIDDNVVLN KGDVLQVSGD
ARRVKTIADR IGFISIHSQV TDLLAFCAFF IIGLMIGMIT FQFSNFSFGI GNAAGLLFAG
IMLGFLRANH PTFGYIPQGA LNMVKEFGLM VFMAGVGLSA GSGISNGLGA VGGQMLIAGL
VVSLVPVVIC FLFGAYVLRM NRALLFGAMM GARTCAPAME IISDTARSNI PALGYAGTYA
IANVLLTLAG TLIVIIWPGL G