Gene SeD_A0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0970 
Symbol 
ID6874509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp962631 
End bp963863 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content55% 
IMG OID642784156 
Productmultidrug resistance protein MdtM 
Protein accessionYP_002214831 
Protein GI198243555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATC GTTTACAATC AGGCGGCAGG CTGGGACGTC AGGCGCTGCT TTTTCCTCTC 
TGTCTGGTGC TGTACGAGTT TTCTACTTAT ATTGGCAACG ACATGATCCA GCCGGGTATG 
CTGGCGGTGG TTGAGCAGTA TCAGGCGGGC CTGGACTGGG TTCCGACGTC CATGACCGCT 
TATCTGGCGG GCGGTATGTT CTTACAGTGG CTGCTTGGCC CGTTGTCTGA CCGGATTGGC 
CGTCGTCCCG TGATGCTGGC GGGCGTCGTG TGGTTTATTG TCACCTGCCT GGCGACGTTA 
CTGGCGAAAA ACATCGAACA ATTTACCTTC CTGCGTTTTT TGCAAGGGAT TAGCCTGTGT 
TTTATCGGCG CTGTAGGGTA TGCCGCGATT CAGGAGTCCT TTGAGGAGGC GGTGTGTATA 
AAAATTACCG CGCTGATGGC GAACGTGGCG TTAATCGCGC CGCTACTGGG ACCACTGGTT 
GGGGCGGCAT GGGTGCATGT TCTGCCGTGG GAGGGGATGT TTATTTTATT TGCCGCACTG 
GCCGCTATCG CCTTTTTCGG GCTACAGCGC GCAATGCCGG AGACCGCCAC GCGGCGGGGC 
GAAACGCTGT CATTTAAGGC GCTGGGCCGG GATTATCGGC TGGTGATAAA AAACCGGCGG 
TTTGTCGCAG GGGCGTTAGC TCTGGGATTT GTCAGCCTGC CGCTGTTGGC CTGGATTGCG 
CAGTCGCCGA TTATCATCAT TAGCGGCGAA CAGCTCAGCA GCTATGAATA TGGTCTGCTA 
CAGGTGCCCG TTTTTGGCGC GCTCATTGCC GGTAATCTGG TGTTGGCGCG TTTAACCTCC 
CGACGTACGG TTCGCTCGCT GATCGTGATG GGCGGCTGGC CTATCGTCGC GGGGCTGATC 
ATCGCCGCGG CGGCGACGGT GGTTTCATCC CATGCTTATT TATGGATGAC GGCGGGATTA 
AGCGTATACG CTTTTGGCAT TGGGCTGGCG AATGCCGGAC TGGTGCGTCT GACGCTCTTC 
TCCAGCGATA TGAGTAAAGG AACGGTCTCG GCGGCGATGG GAATGCTACA AATGCTGATT 
TTTACCGTTG GCATTGAAGT CAGTAAACAC GCCTGGTTAA GCGGCGGCAA TGGGCTATTT 
AGCCTGTTTA ATCTGGCAAA CGGTATTCTT TGGCTACTGC TGATGCTGGT CTTCTTAAAA 
GATAAGCGGA CGGGGAATTC GCAAACAGTC TGA
 
Protein sequence
MQNRLQSGGR LGRQALLFPL CLVLYEFSTY IGNDMIQPGM LAVVEQYQAG LDWVPTSMTA 
YLAGGMFLQW LLGPLSDRIG RRPVMLAGVV WFIVTCLATL LAKNIEQFTF LRFLQGISLC 
FIGAVGYAAI QESFEEAVCI KITALMANVA LIAPLLGPLV GAAWVHVLPW EGMFILFAAL 
AAIAFFGLQR AMPETATRRG ETLSFKALGR DYRLVIKNRR FVAGALALGF VSLPLLAWIA 
QSPIIIISGE QLSSYEYGLL QVPVFGALIA GNLVLARLTS RRTVRSLIVM GGWPIVAGLI 
IAAAATVVSS HAYLWMTAGL SVYAFGIGLA NAGLVRLTLF SSDMSKGTVS AAMGMLQMLI 
FTVGIEVSKH AWLSGGNGLF SLFNLANGIL WLLLMLVFLK DKRTGNSQTV