Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0968 |
Symbol | |
ID | 6875572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 960880 |
End bp | 961638 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642784154 |
Product | DNA-binding transcriptional repressor DeoR |
Protein accession | YP_002214829 |
Protein GI | 198244451 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACGC GACGCGACGA GCGTATTGGT CAATTGCTGC AGGCCTTAAA ACGCAGCGAT AAACTTCATC TTAAAGAAGC CGCGACCCTG TTGGGCGTCT CTGAAATGAC CATTCGTCGC GACCTGAACC ATAAAAGCGC TCCTGTCGTG TTGCTGGGCG GCTATATCTT ACTGGAGCCC CGCAGCGCCA GCCATTATCT GTTAAGCGAT CAAAAATCTC GTCTGGTGGA AGAAAAACGC CGAGCCGCTC AGTTGGCTGC GGGCCTGGTA CAAGCCCATC AGACGGTATT TATTGACTGT GGCACCACCA CGCCGTGGAT CATTGAAGCC ATTGATAATG ACCTTCCCTT TACGGCGGTG TGCTATTCAC TTAATACCTT TCTGGCGCTG CAGGACAAAC CCCATTGCCG CGCCATCCTC AGCGGCGGGG AGTTTCACGC CAGCAACGCC ATTTTCAAAC CGCTTGATTT CCATGAAACG TTAAACAATA TTTGTCCGGA TATCGCGTTT TATTCCGCCG CTGGCGTTCA TACCAGTAAA GGCGCTACCT GCTTTAATCT GGAAGAGCTG CCGGTAAAAC ATTGGGCAAT GACAATGGCA CAGTGCCATG TACTGGTGGT GGATCACAGT AAATTCGGCA AGGTACGTCC GGCGCGGATG GGGGAATTAT CACGCTTTGA TACGATTATC AGCGACCGCC GTCCCGATGA GGCCTTTGTG GCCTACGCTA AAGCGCAACA AATTACTCTG ATGTATTAA
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Protein sequence | METRRDERIG QLLQALKRSD KLHLKEAATL LGVSEMTIRR DLNHKSAPVV LLGGYILLEP RSASHYLLSD QKSRLVEEKR RAAQLAAGLV QAHQTVFIDC GTTTPWIIEA IDNDLPFTAV CYSLNTFLAL QDKPHCRAIL SGGEFHASNA IFKPLDFHET LNNICPDIAF YSAAGVHTSK GATCFNLEEL PVKHWAMTMA QCHVLVVDHS KFGKVRPARM GELSRFDTII SDRRPDEAFV AYAKAQQITL MY
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