| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0953 |
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| Symbol | rimO |
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| ID | 6874624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 947649 |
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| End bp | 948974 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784142 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_002214817 |
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| Protein GI | 198242582 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.433184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAATG TAACCCACCA GCCAAAGATC GGCTTCGTTT CCCTGGGCTG TCCGAAAAAC
CTCGTTGATT CGGAACGCAT CCTGACTGAG CTGCGTACCG AAGGCTATGA CGTTGTGCCA
CGCTATGACG ATGCGGATAT GGTTATCGTT AATACCTGTG GCTTTATTGA CAGCGCGGTA
CAAGAGTCAC TGGAAGCCAT TGGCGAAGCG CTGAACGAAA ACGGTAAGGT AATCGTCACC
GGCTGCCTGG GCGCAAAAGA AGATCAGATC CGCGAAGTGC ATCCGAAAGT ACTGGAAATC
ACCGGGCCGC ATAGCTATGA GCAAGTTCTG CAGCACGTAC ATCATTACGT ACCGAAGCCG
AAGCACAATC CATTTTTAAG CCTCGTACCA GAACAGGGTG TAAAACTGAC GCCGCGCCAT
TATGCGTATC TGAAAATTTC TGAAGGCTGT AATCACCGCT GCACGTTCTG CATCATCCCG
TCGATGCGCG GGGATCTGGT CAGCCGTCCG ATTGGCGACG TATTAAGCGA AGCGAAACGT
CTGGTTGATG CCGGGGTCAA AGAGATTCTG GTGATTTCGC AAGATACCTC CGCCTACGGC
GTAGATGTGA AGCACCGCAC CGGATTCCAT AATGGCGAAC CGGTGAAAAC CAGTATGGTG
AGCCTGTGCG AGCAGTTATC AAAACTGGGC GTCTGGACAC GTCTGCACTA CGTCTACCCC
TACCCACACG TTGATGATGT GATTCCGCTA ATGGCGGAAG GCAAAATCCT GCCTTATCTG
GACATTCCGC TGCAACATGC CAGCCCGCGG ATTCTTAAAC TGATGAAACG TCCCGGTTCC
GTTGACCGCC AGCTGGCGCG CATTAAGCAG TGGCGCGAAA TCTGCCCGGA ACTGACCCTA
CGCTCCACCT TTATTGTCGG CTTCCCCGGC GAAACGGAAG AAGACTTCCA GATGCTGCTC
GACTTCCTGA AAGAGGCGCG CCTCGATCGT GTAGGCTGCT TCAAGTACAG CCCGGTGGAA
GGCGCAGGCG CGAATGAGCT GCCGGATCAG GTGCCGGAAG AGGTGAAAGA AGAGCGCTGG
AACCGCTTTA TGCAACTGCA ACAGCAAATC TCCGCTGAGC GCTTGCAGGA AAAAGTGGGC
CGCGAAATTC TGGTGATCGT CGATGAGGTT GACGAAGAAG GCGCTATCGG GCGTAGCATG
GCGGATGCGC CGGAAATTGA CGGCGCGGTC TATTTGAACG GCGAAACCAA CGTCAAGCCG
GGCGATATCG TGCGCGTGAA AGTGGAAAAC GCCGACGAAT ATGATTTGTG GGGCAGTCGG
GTTTAA
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| Protein sequence | MSNVTHQPKI GFVSLGCPKN LVDSERILTE LRTEGYDVVP RYDDADMVIV NTCGFIDSAV
QESLEAIGEA LNENGKVIVT GCLGAKEDQI REVHPKVLEI TGPHSYEQVL QHVHHYVPKP
KHNPFLSLVP EQGVKLTPRH YAYLKISEGC NHRCTFCIIP SMRGDLVSRP IGDVLSEAKR
LVDAGVKEIL VISQDTSAYG VDVKHRTGFH NGEPVKTSMV SLCEQLSKLG VWTRLHYVYP
YPHVDDVIPL MAEGKILPYL DIPLQHASPR ILKLMKRPGS VDRQLARIKQ WREICPELTL
RSTFIVGFPG ETEEDFQMLL DFLKEARLDR VGCFKYSPVE GAGANELPDQ VPEEVKEERW
NRFMQLQQQI SAERLQEKVG REILVIVDEV DEEGAIGRSM ADAPEIDGAV YLNGETNVKP
GDIVRVKVEN ADEYDLWGSR V
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