Gene SeD_A0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0949 
Symbol 
ID6874376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp942221 
End bp944092 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content57% 
IMG OID642784138 
Productglutathione transporter ATP-binding protein 
Protein accessionYP_002214813 
Protein GI198244499 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCACA GCGATGAACT GGATAGCCGC GATGTTCTGT CCGTCAGTGG CCTGAATATC 
GCGTTTCACC ACGAAGGGCA ACAGGTAGAC GCCGTGCGTA ATGTGTCATT ACGCCTGAAG
CGTGGAGAGA CTCTGGCGAT TGTCGGCGAG TCGGGATCGG GAAAATCGGT GACGGCGCTG
GCGTTAATGC GGCTGATTGA GCAGTCGGGC GCGAACGTGC GCTGCGGCGA AATGCTGTTG
CGTCGGCGTA ATCGCCAGGT GATTGAGTTG TCTGAGCAGA GTGACGCGCA GATGCGGCGT
GTGCGCGGCG CGGATATCGC CATGATTTTC CAGGAGCCAA TGACCTCGCT CAACCCGGTA
TTTACCGTTG GCGAGCAAAT TGCCGAATCT ATTCGTTTGC ATCAGGGGGC CAGCCACGAA
GAGGCGCTGG CGGAAGCGAA ACGTATGCTC GATCAGGTAC GGATCCCGGA GTCGCAGGCG
ATTTTATCGC GTTATCTGCA TCAGCTTTCC GGCGGGATGC GCCAGCGAGT CATGATCGCG
ATGGCGCTAT CCTGCCGTCC GGCGGTATTG ATTGCCGATG AACCCACCAC GGCGCTGGAT
GTCACTATCC AGGCGCAAAT TCTGCAACTT ATCAAAGTGT TGCAGCAAGA GATGTCGATG
GGCGTGATTT TTATCACCCA CGACATGGGC GTCGTGGCGG ATATTGCCGA TCGCGTGCTG
GTGATGTATC AAGGCGAGGC CGTGGAAACC GGCAGCGTAG AGCAGATTTT CCATGCGCCG
ACGCATCCTT ATACCCAAAC GTTGCTGGCC GCCGTCCCTC AGCTTGGCGC GATGCGCGGC
CACTCGCTGC CACGCCGTTT CCCGTTGATT TCCGCTGACG AACCGGCCCT TTATGAATCG
CAGATTGAGC AAGACACGGT GGTGGAAGGC GAGCCTATTC TCCAGGTTCG GGGGCTGGTG
ACGCGATTCC CGCTACGTAG CGGTCTCTTT AACCGCGTTA CGCGTGAAGT TCATGCCGTT
GAGAATATCA GTTTCGATCT CTGGCCCGGC GAAACGCTAT CGCTGGTGGG CGAGTCCGGT
AGCGGAAAAT CGACGACCGG ACGCGCGCTG CTGCGGTTGG TTGAATCCCG GCAGGGGGAG
ATTATCTTTA ACGGCCAGCG CATTGACTCG CTGTCTGCGG GCAAACTCCA GCCGTTGCGC
CGCGATATTC AGTGTATTTT CCAGGACCCT TACGCCTCGC TCGACCCGCG CCAGACCGTG
GGGTATTCCA TTATGGAACC TTTACGGATT CATGGCCTGG GGCAGGGGGA CGCTGCGGCA
AAGCGCGTGG CCTGGTTGCT TGAGCGTGTC GGATTACGGC CTGAACATGC CTGGCGTTAT
CCGCATGAGT TTTCCGGCGG TCAACGTCAG CGCATCTGTA TTGCTCGCGC GTTGGCATTG
AATCCTAAAG TGATTATTGC CGATGAGGCG GTCTCCGCGC TGGATGTTTC CGTTCGCGGA
CAGATCATTA ATTTACTGCT TGATTTACAA CGGGAAATGG GGATCGCCTA CCTGTTTATT
TCGCATGATA TGGCGGTCGT GGAGCGAATT AGCCATCGCG TGGCGGTGAT GTATCTTGGT
CAAATTGTTG AAATGGGGCC GCGGCGCGCC GTTTTTGAAA ATCCGCAGCA TCCTTATACG
CGTAAATTGA TGGCGGCGGT GCCGGTTGCC GATCCCTCCA GACACCGGCC GCGGCGCGTT
CTGCTATCAG ATGATATACC CAGCAATATT CATAAACGTG GCGAAGAGAC GCCCGCCGTT
TCATTACAGT TGGTCGGGCC GGGACATTAT GTTGCGCGGC CGCTGCAGGA TAATGCGCTC
TCGCGCTTAT AA
 
Protein sequence
MPHSDELDSR DVLSVSGLNI AFHHEGQQVD AVRNVSLRLK RGETLAIVGE SGSGKSVTAL 
ALMRLIEQSG ANVRCGEMLL RRRNRQVIEL SEQSDAQMRR VRGADIAMIF QEPMTSLNPV
FTVGEQIAES IRLHQGASHE EALAEAKRML DQVRIPESQA ILSRYLHQLS GGMRQRVMIA
MALSCRPAVL IADEPTTALD VTIQAQILQL IKVLQQEMSM GVIFITHDMG VVADIADRVL
VMYQGEAVET GSVEQIFHAP THPYTQTLLA AVPQLGAMRG HSLPRRFPLI SADEPALYES
QIEQDTVVEG EPILQVRGLV TRFPLRSGLF NRVTREVHAV ENISFDLWPG ETLSLVGESG
SGKSTTGRAL LRLVESRQGE IIFNGQRIDS LSAGKLQPLR RDIQCIFQDP YASLDPRQTV
GYSIMEPLRI HGLGQGDAAA KRVAWLLERV GLRPEHAWRY PHEFSGGQRQ RICIARALAL
NPKVIIADEA VSALDVSVRG QIINLLLDLQ REMGIAYLFI SHDMAVVERI SHRVAVMYLG
QIVEMGPRRA VFENPQHPYT RKLMAAVPVA DPSRHRPRRV LLSDDIPSNI HKRGEETPAV
SLQLVGPGHY VARPLQDNAL SRL