Gene SeD_A0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0914 
Symbol 
ID6874172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp908830 
End bp909504 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content53% 
IMG OID642784107 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002214782 
Protein GI198244898 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.198187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC CCACTACGAC CACCAAGGGC GAGCAGGCGA AAAGTCAGCT CATTGCCGCC 
GCGCTGGCGC AGTTTGGCGA GTATGGCCTC CATGCTACCA CGCGCGATAT CGCTGCGCTG 
GCGGGGCAAA ATATTGCCGC CATTACTTAC TATTTCGGCT CAAAAGAGGA TTTATACCTC 
GCCTGCGCCC AGTGGATTGC CGATTTTCTT GGCGAAAAAT TTCGCCCCCA TGCTGAAAAA 
GCGGAGCGTC TGTTTAGCCA GCCTGCCCCT GACCGGGACG CCATACGCGA GCTCATTCTG 
CTCGCCTGCA AGAACATGAT TATGCTGCTG ACGCAGGAAG ACACCGTTAA CCTGAGCAAA 
TTTATTTCAC GCGAGCAGCT CTCTCCCACG TCGGCCTATC AATTGGTCCA TGAACAGGTT 
ATCGATCCGT TGCACACCCA TCTGACAAGA TTGGTTGCCG CTTATACCGG CTGCGACGCC 
AATGATACGC GCATGATTTT GCATACCCAT GCCTTACTGG GAGAAGTACT GGCGTTTCGT 
CTCGGCAAAG AAACTATTCT GTTACGTACC GGCTGGCCGC AGTTTGATGA AGAAAAAGCG 
GAGCTGATTT ACCAGACGGT AACCTGCCAC ATCGATCTTA TTCTGCACGG TTTAACGCAA 
AGGAGTCTGG ACTGA
 
Protein sequence
MNIPTTTTKG EQAKSQLIAA ALAQFGEYGL HATTRDIAAL AGQNIAAITY YFGSKEDLYL 
ACAQWIADFL GEKFRPHAEK AERLFSQPAP DRDAIRELIL LACKNMIMLL TQEDTVNLSK 
FISREQLSPT SAYQLVHEQV IDPLHTHLTR LVAAYTGCDA NDTRMILHTH ALLGEVLAFR 
LGKETILLRT GWPQFDEEKA ELIYQTVTCH IDLILHGLTQ RSLD