Gene SeD_A0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0908 
Symbol 
ID6873649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp902498 
End bp903256 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content57% 
IMG OID642784101 
Productendonuclease/exonuclease/phosphatase family protein 
Protein accessionYP_002214776 
Protein GI198243219 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0916506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC ACACGCGAAA TTTTTCATTC AAAGTGCTCA CAATTAATAC GCACAAAGGT 
TTTACCGCCT TTAATAAACG CTTCATCCTG CCGGAGCTGC GCGACGCCGT CAGAACGGTC
GGCGCCGATA TCGTCTGTCT GCAAGAAGTG ATGGGCGCGC ACGAAGTGCA TCCGCTGCAT
ATCGAAAACT GGCCGGACAC TACCCACTAT GAATTTTTAG CCGACACCAT GTGGAGCGAT
TTCGCCTATG GCCGCAATGC GGTCTATCCG GAAGGCCACC ACGGTAACGC GGTTCTTTCT
CGCTATCCCA TTGAACATTA TGAAAATCGC GACGTCTCGG TCGGCGGTAG CGAAAAACGC
GGCGTGCTCT ATTGCCGCAT TACGCCGCCC ATGCTCAACC GCCCTATCCA CGTCATGTGC
GTACATCTCG GCCTGCGGGA GAGCCACCGT CAGGCGCAGT TAACCATGCT GGCGGGATGG
GTGAATGCCT TGCCGGAATC AGAACCGGTG CTGGTGGCCG GAGACTTTAA TGACTGGCGG
CAAAAAGCCG GCCCGCCGTT AAACGCGGCC GGGCTGGAGG AGATATTCAC CCGTGCCCAT
GGCCGACCGG CGCGCACATT CCCGGTGAGT ATGCCGCTGC TGCGACTCGA TCGTATTTAC
GTCAAGAATG CGAACGCCAG TTCTCCTACG GCGCTGCCGC TGCGGAACTG GCGACATTTA
TCAGACCATG CCCCCCTTAG CGCGGAGATC CATCTATGA
 
Protein sequence
MTQHTRNFSF KVLTINTHKG FTAFNKRFIL PELRDAVRTV GADIVCLQEV MGAHEVHPLH 
IENWPDTTHY EFLADTMWSD FAYGRNAVYP EGHHGNAVLS RYPIEHYENR DVSVGGSEKR
GVLYCRITPP MLNRPIHVMC VHLGLRESHR QAQLTMLAGW VNALPESEPV LVAGDFNDWR
QKAGPPLNAA GLEEIFTRAH GRPARTFPVS MPLLRLDRIY VKNANASSPT ALPLRNWRHL
SDHAPLSAEI HL