Gene SeD_A0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0888 
SymbolbioA 
ID6875078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp882966 
End bp884264 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID642784083 
Productadenosylmethionine--8-amino-7-oxononanoate transaminase 
Protein accessionYP_002214758 
Protein GI198244024 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGG ACGATCTGGC CTTCGATAAA CGCCATATTT GGCATCCTTA CACTTCCATG 
ACCTCGCCGC TGCCGGTATA TCCCGTTGAG CGGGCCGAAG GCTGCGAGCT GGTTCTCGCC
TCGGGCGAAC GCCTGATTGA GGGGATGTCC TCCTGGTGGG CGGCCATTCA TGGTTATAAC
CACCCGCAAT TGAATGCGGC GATGAAAGCG CAAATTGACG CCATGTCGCA TGTCATGTTC
GGCGGCATAA CCCATACACC TGCGGTGAAT CTGTGCCGTA AGCTGGTCGC GATAACGCCT
GAGCCGCTGG AGTGTGTCTT TCTGGCCGAC TCTGGTTCGG TGTCGGTAGA AGTGGCCATG
AAGATGGCGC TGCAATACTG GCAGGCGCGC GGCGAATCGC GTCAGCGTTT TCTGACGTTT
CGCCACGGTT ATCATGGCGA CACGTTCGGC GCGATGTCGG TGTGCGATCC GGATAACTCC
ATGCACAGCT TGTGGAAAGG CTATCTGCCG GAAAACCTGT TCGCGCCGGC GCCGCAAAGC
CGGATGGATG GCGAATGGGA TGAAAGCGAC ATCGCGCCAT TTGCCCGCCT GATGGCCGCG
CATCGCCATG AAATAGCCGC CGTGATTCTG GAACCTATCG TTCAGGGCGC GGGCGGGATG
CGCATATATC ATCCACAATG GCTCAGGCGT ATTCGTAACA TGTGCGATCG CGAAGGCATT
CTGCTGATTG CCGATGAAAT AGCCACCGGG TTTGGCCGTA CCGGCAAACT GTTCGCCTGC
GAGCACGCCG GGATCGCGCC GGATATTCTG TGTCTCGGCA AAGCCTTAAC CGGCGGCACC
ATGACCCTCT CGGCAACGCT CACGACACGC CAGGTTGCAG AGACTATTAG CAACGGCGAG
GCGGGGTGTT TTATGCATGG CCCGACGTTT ATGGGGAATC CGCTGGCCTG CGCCGTCGCT
TGCGCCAGCC TGACGCTGCT GGAAAGCGGC GAATGGCGTC AGCAGGTGGC GTCTATCGAG
TCTCAGTTAC GCGCTGAGTT AGCCCCCGCG CAAAGTTCGC CCTGGGTGGC GGATGTGCGG
GTGTTGGGCG CGATTGGGGT GGTTGAAACC ACGCACACGG TCAATATGGC GGCGCTTCAA
CGCTTCTTCG TCGGGCAAGG CGTCTGGATC AGGCCGTTCG GCAAGCTAAT CTACCTGATG
CCGCCCTACA TTATTCGTCC GGATCAACTG CGCCGTTTGA CCCAGGCGGT CAATGACGCG
GTACACAATG AAACATTTTT AGCCATTAAT CAGCGGTAA
 
Protein sequence
MTTDDLAFDK RHIWHPYTSM TSPLPVYPVE RAEGCELVLA SGERLIEGMS SWWAAIHGYN 
HPQLNAAMKA QIDAMSHVMF GGITHTPAVN LCRKLVAITP EPLECVFLAD SGSVSVEVAM
KMALQYWQAR GESRQRFLTF RHGYHGDTFG AMSVCDPDNS MHSLWKGYLP ENLFAPAPQS
RMDGEWDESD IAPFARLMAA HRHEIAAVIL EPIVQGAGGM RIYHPQWLRR IRNMCDREGI
LLIADEIATG FGRTGKLFAC EHAGIAPDIL CLGKALTGGT MTLSATLTTR QVAETISNGE
AGCFMHGPTF MGNPLACAVA CASLTLLESG EWRQQVASIE SQLRAELAPA QSSPWVADVR
VLGAIGVVET THTVNMAALQ RFFVGQGVWI RPFGKLIYLM PPYIIRPDQL RRLTQAVNDA
VHNETFLAIN QR