Gene SeD_A0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0872 
Symbol 
ID6874923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp866001 
End bp866909 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID642784067 
Producthypothetical protein 
Protein accessionYP_002214742 
Protein GI198246117 
COG category[S] Function unknown 
COG ID[COG4714] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTC GTTTTCCACA AATAATACTA TTTTTACTGG CAGCCATGTT ATTTTGCCCC 
AGCAGTTATG CTGAGCAAAA GCCGACCGCT GCGCAGGAAG CGCGTAAAAC CGCCGTTGAG
GTCGCTGTTG AAGGCATGAG TCGCGCCGCC GTTGCGGGTC CGACAAAGAT TAGTTTAGGT
GATAAAGCCA CGCTTAATCT GCCGGAAGGA TTTACCTGGA TACCCGCAAA AGAAGCGGCG
GTATTTATGC GTGAAATTGG TAACTATGTT GACGATGAAT ATTTTTACGG TCTCGTATTT
AAAAAGGAAA TGAATGGATT TATTTCTATC GAATATGATG ATTCTGGTTA TGTAAAAGAT
GATGATGCAA AAAATTGGGA TGCCGATGAA TTAATGGATA ACCTGCGCAA AGGCACAAAA
GAAGCGAATA AAGATCGTAT TGCAAAAGGC ATTGAGCCGA TAGAAATTAT TGGCTGGATC
GAGAAGCCTA CCTACGATGC AACCAATCAT CGTCTGATCT GGTCCGCCGC CATCCAGGAT
ATCGGCACCA ACGAACCACT GAATGAACAA GGCGTGAACT ACAACACCTA TCTGCTGGGA
CGTGAAGGCT ATTTTTCTTT AAATCTGGTG ACCGACAGAG GTTCTGTTGA CCACGAAATC
CCTCTGGCGA AAAGAATTCT CAGTTCCGTC AAGTTCAACG CTGGACAACG CTACGCTGAC
TTCAACGAAT CAACGGACAA AATAGCGGAG TATGGGCTCG CCGCGCTGAT TGGCGGTATC
GCGGCCAAAA AAGTAGGTCT GCTTGCTATG CTCGGTATCG CGTTGCTTAA GTTCTGGAAA
GTGACCGCCA TCGGCGTCGT TGCCGTCGGG GCGCTCGCCA GGAAGCTACT CTCGCGTAAA
AAAGACTGA
 
Protein sequence
MAFRFPQIIL FLLAAMLFCP SSYAEQKPTA AQEARKTAVE VAVEGMSRAA VAGPTKISLG 
DKATLNLPEG FTWIPAKEAA VFMREIGNYV DDEYFYGLVF KKEMNGFISI EYDDSGYVKD
DDAKNWDADE LMDNLRKGTK EANKDRIAKG IEPIEIIGWI EKPTYDATNH RLIWSAAIQD
IGTNEPLNEQ GVNYNTYLLG REGYFSLNLV TDRGSVDHEI PLAKRILSSV KFNAGQRYAD
FNESTDKIAE YGLAALIGGI AAKKVGLLAM LGIALLKFWK VTAIGVVAVG ALARKLLSRK
KD