Gene SeD_A0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0865 
Symbol 
ID6871175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp858598 
End bp859677 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID642784060 
ProductABC transporter permease 
Protein accessionYP_002214735 
Protein GI198244731 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGTC AGGACAAATC ACTTTTAGCC CCCGCTCTCG CTTCCACGCC CGTCATTCCG 
CGCTATCGCC AGATCATACG CAAACGGGCT GTGCTCATGT TAGCTATTGC GTTGGCGATG
ATGACTTCAC TGATGGTGGA TGTAACCTGT GGGTCTTCTG GTTTACCGCT CAGTGCGCTA
TGGCAGGCGC TTTTTCAACC GGAAAAGGTG AATGCGGGCA TACACGTTAT TGTCTGGGAT
ATTCGTTTAC CCTATGCCCT GATGGCCCTA CTGGTGGGCA TGGCGTTAGG GTTAGCGGGC
GCCGAAATGC AAACCATTTT AAATAATCCG CTGGCGACGC CGTTTACCCT CGGCGTATCG
TCCGCGGCGG CTTTTGGCGC TGCGCTGGCG ATTGTGTTGG GGATCGGTAT TCCCGGTATT
CCTGCCGCCT GGTTTATCCC GGCCAATGCG TTCATCTTTG CGCTTTTATC CGCGTTACTC
CTGGACGGTA TTACCCGTTG GACAGGCGTC GCCGCATCCG GAGTGGTGTT GTTCGGTATT
GCACTGGTAT TCACCTTTAA CGCGTTGGTC GCCATTATGC AGTTTGTGGC TGATGAAGAT
ACGCTGCAGG GGCTGGTATT CTGGACGATG GGGAGCCTGG TCCGCGCGTC GTGGGAAAAA
TTGGGCGTAC TGGCCGTGGT GTTTATTGCT GTGCTTTTTT GCGCGTTACG AAGCGCCTGG
CAACTCACGG CATTACGTCT GGGCGAAGAG AGGGCGATGA GCTTTGGGAT TCATGTCCGC
CGTTTACGCC TGCTGTCATT GTTGCGTATC AGCTTGTTAT CAGCGCTGGC GGTAGCTTTC
GTCGGGCCGA TTGGTTTTAT TGGTCTCGTT GCACCGCACA TTGCACGAAT ACTTTTGGGG
GAAGATCACC GTTTCTACCT TCCGGGCAGC GTGCTGATAG GCGGGCTGGT GTTATCGCTG
GCCTCTATTG CGGCGAAAAA TAGTATTCCG GGCGTCATGG TGCCGGTGGG GATTGTCACC
TCGCTGGTCG GGGTTCCGTT CTTTTTAAGC ATTGTATTGC GACATCGGGG GAGTCTCTGA
 
Protein sequence
MTCQDKSLLA PALASTPVIP RYRQIIRKRA VLMLAIALAM MTSLMVDVTC GSSGLPLSAL 
WQALFQPEKV NAGIHVIVWD IRLPYALMAL LVGMALGLAG AEMQTILNNP LATPFTLGVS
SAAAFGAALA IVLGIGIPGI PAAWFIPANA FIFALLSALL LDGITRWTGV AASGVVLFGI
ALVFTFNALV AIMQFVADED TLQGLVFWTM GSLVRASWEK LGVLAVVFIA VLFCALRSAW
QLTALRLGEE RAMSFGIHVR RLRLLSLLRI SLLSALAVAF VGPIGFIGLV APHIARILLG
EDHRFYLPGS VLIGGLVLSL ASIAAKNSIP GVMVPVGIVT SLVGVPFFLS IVLRHRGSL