Gene SeD_A0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0860 
Symbol 
ID6873256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp852733 
End bp854001 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content38% 
IMG OID642784055 
Productanion transporter 
Protein accessionYP_002214730 
Protein GI198243401 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.918843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCAG CGATTATTAC TTTGTTGGTT TTAGTGGTTG CAATAATTAT CTTTGTTAGC 
GATCGTCTTC CTATGGGATT AGTTGCATTT ATGGTCCCAA TGGCACTTTA TTTTACCGGT 
GTTATCGATG CTAAGGATAT TTTTGCTTCA ATCGTAAATG CGAATGTTAT TCTTATCGTC 
GCCATGTGTG TACTCGGTGC GGCATTTTTT AAAACAGGTT TGGCATGGCA ATCAAGTAAA 
ATTTTACTAA AATATGCTAA AACAGAAAGA AGCCTTAGTG TATTGATTTT TCTTATTGGT 
GGAGTTATGT CTGCCTTTGT TTCTAATAGC GGAACAGTTG CTGTGCTAAT TCCTATTGTT 
TTAGGTATTG CCGCCAGTAG TCAGATTAAG CCTATTAAAC TTCTTATGCC TCTGGTTTTT 
GGGGCAACAA TCGGTGCTGA TATTTCTATT ATCGGTTCGC CAGGAAATCT GATTGCTAAA 
AATACTATTG AAACTTTTAG TAAGGGAAGT CTGTCGGTGC CATTTTTCGA ATACGCTAAA 
ATTGGTATTC CTTTGCTGAT TGCATGCTCT ATATTTCTCT ATTTCTTCGG TTCAAAACTC 
ATCGCAGATC GTGATGGAAA TACACAATCT GATTCTCAAA TGGATTATAG CCAAATTCCG 
GCCTGGCATA GAAATTTAAC TTTAGCCGTT TTTATTCTGT CTATCGCTGG AATGGTGGCA 
ACTGATTATA TTAAGTTTCT GCCTCCAATG CATATTATTG CGTGTTGTGC GGCTATTGTT 
CTTGTATTTG CTGGCGTTTT GACACAAAAG GAAACTTTTA ATTCTTTTGA AACACTAACT 
GTTTTCATGC TTGCGTTTAT GATGCCTTTA GGAGCCGCGC TGAATTCTAC TGGTGCTGGA 
GAAATGATTG CTAATGCCGT TATTTCAGTA ACCGGAGATT CTGGCGTTAT GATTATTATG 
GCGTCATTGT GGATACTTAC ATGGGCTTTG ACTCAAGTTA TGAGTAACAC TGCAGCATGT 
ACGTTGTTAT GCCCGGTAGG ATGGACTATC GCACAGTCTA TTGGCGCAGA CCCTCGTGCA 
GTTGTTATTG CTGTTTTTAT TGCGAGTAGT GTTGCTGTTT GTACCCCAAT GGCTATTCCA 
GCAAACTCAA TGATTATTGG CCCGGGGAAT GTTAAATTTA AAGATTTTTT AAAACCCGGA 
TTGGCGATTA GTTTGGTTTG TTTTATCGTT AGTATGATTT TACTACCGAT ATTTTATCCC 
TTCTATTAA
 
Protein sequence
MSPAIITLLV LVVAIIIFVS DRLPMGLVAF MVPMALYFTG VIDAKDIFAS IVNANVILIV 
AMCVLGAAFF KTGLAWQSSK ILLKYAKTER SLSVLIFLIG GVMSAFVSNS GTVAVLIPIV 
LGIAASSQIK PIKLLMPLVF GATIGADISI IGSPGNLIAK NTIETFSKGS LSVPFFEYAK 
IGIPLLIACS IFLYFFGSKL IADRDGNTQS DSQMDYSQIP AWHRNLTLAV FILSIAGMVA 
TDYIKFLPPM HIIACCAAIV LVFAGVLTQK ETFNSFETLT VFMLAFMMPL GAALNSTGAG 
EMIANAVISV TGDSGVMIIM ASLWILTWAL TQVMSNTAAC TLLCPVGWTI AQSIGADPRA 
VVIAVFIASS VAVCTPMAIP ANSMIIGPGN VKFKDFLKPG LAISLVCFIV SMILLPIFYP 
FY