Gene SeD_A0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0859 
Symbol 
ID6873496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp851527 
End bp852474 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content40% 
IMG OID642784054 
Producttranscriptional regulator 
Protein accessionYP_002214729 
Protein GI198243905 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.362505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAATAA GGTTGCAGCT TATGCAATAT CGGCATCACC TCGAACTAAC ATGGCTCGAA 
GACTGTCTGG CTCTAAAAGA AACGTTGAAT TTCTCAAAAG CGTCTGCCTC AAGATATGTG 
ACTCAACCCG CATTTAGTCG TCGGATACAA TCTCTCGAAG AATGGGTGGG TACGCCCCTT 
TTTGAAAGAA GTAAACGGGG AGTCACCCTT ACCAAGGCCG GAGAAGTATT TACAGACCAG 
CTTCCCGAAC TGATCCACTC CTTGTACACA TTGAAAAGTG ATACCCTTGA GGCTGCAGGT 
AATAAACAAC CTAGTCTTGT TTTTTCAGCA ACGCATGCTT TGTCTTTCTC TTTTGTACCG 
CACTTGTTAA AGCAAAGTGA TAAAATTGCA AAATTTGGTT CATTTCGTCT TTTATCTGAC 
TCATTGAATG CGTGCGAAAA AATGATGCGG CAGGGAGATT CACAATTTTT GCTGTGTCAC 
CATCACCCAC ATATGCATCT AAATTTAAAT AAAAATCACT TTATGAGCAT TCGTCTTGGG 
TTTGATACAT TAATTCCATT CAGTAAACCA GACTCAGAAA CGTTAAAACC GTTGTGGAAT 
ATAAATAATA AGATTCAATT CCCTTACCTT TCTTTTTCAT CACAATCAGG TCTGGGAAGA 
ATAATAGCAA ATACAGCGTC TATTAACAGA ATTACCCATA ATATAAATGT TGCCTTTGTG 
GCCGATCTGG CAGCAACACT ATTGGCAATG GTCAGATCTG GCGATGGTGT TGCCTGGATA 
CCTCAAAGCC TTGCCAGGCA AGATATAGAG GCTAAAACTA TTGTTACTGC AGCGGAAAAA 
GAAAGCAATT TATGGGTACC CATAGAAATA AGACTTTATA GACCAGCCAA GAGAATGCCT 
CCAGATGCCG AAGAGCTATG GGAAATTTTT GTTGAAGAAC AAATATAA
 
Protein sequence
MLIRLQLMQY RHHLELTWLE DCLALKETLN FSKASASRYV TQPAFSRRIQ SLEEWVGTPL 
FERSKRGVTL TKAGEVFTDQ LPELIHSLYT LKSDTLEAAG NKQPSLVFSA THALSFSFVP 
HLLKQSDKIA KFGSFRLLSD SLNACEKMMR QGDSQFLLCH HHPHMHLNLN KNHFMSIRLG 
FDTLIPFSKP DSETLKPLWN INNKIQFPYL SFSSQSGLGR IIANTASINR ITHNINVAFV 
ADLAATLLAM VRSGDGVAWI PQSLARQDIE AKTIVTAAEK ESNLWVPIEI RLYRPAKRMP 
PDAEELWEIF VEEQI