Gene SeD_A0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0852 
Symbol 
ID6871817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp845485 
End bp846204 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID642784047 
ProductNMN family, nucleoside/purine/pyrimidine transporter 
Protein accessionYP_002214722 
Protein GI198244360 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3201] Nicotinamide mononucleotide transporter 
TIGRFAM ID[TIGR01528] nicotinamide mononucleotide transporter PnuC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00354956 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT TTAGTACGCA CAACATACTG ATTCATATTC CGATTGGCGC TGGCGGGTAC 
GATCTCTCGT GGATCGAAGC GGTAGGAACC ATCGCCGGCC TGCTCTGTAT TTGGCTTGCC
AGTCTGGAGA AGATCAGCAA CTACTTTTTT GGACTGGTTA ACGTCACCCT GTTTGCGATT
ATTTTCTTTC AGATCCAGCT TTATGCCAGC CTGTTGCTGC AACTCTTTTT CTTTGCCGCC
AATATTTATG GCTGGTATGC GTGGTCGCGG CAAACAAAGG ATAATGAAGC CGAGCTTAAA
ATCCGCTGGC TGCCGTTGCC AAAAGCAATG GCATGGCTGG CGATATGTGT GATAGCTATC
GGTTTGATGA CGCGATATAT CGATCCCGTA TTCGCCGTCC TGACGCGCGT GGCCGTCGCC
ATTATGCAGA TGCTGGGGTT ACAGGTGACA ATGCCTGTAC TGCAACCGGA CGCTTTCCCG
TTCTGGGACT CTTGCATGAT GGTGCTGTCT ATCGTGGCGA TGATTTTGAT GACACGCAAA
TATGTCGAAA ACTGGCTCCT GTGGGTGATA ATCAACGTAA TCAGTGTGGT GATTTTTGCT
TTGCAGGGCG TCTATGCGAT GTCGCTGGAA TATCTGATCC TGACATTTAT CGCCGTGAAC
GGTAGTCGCC TGTGGATAAA CAGCGCGCGG GAGCGAGGAT CGCGCGCGCT TTCCCGTTAA
 
Protein sequence
MDFFSTHNIL IHIPIGAGGY DLSWIEAVGT IAGLLCIWLA SLEKISNYFF GLVNVTLFAI 
IFFQIQLYAS LLLQLFFFAA NIYGWYAWSR QTKDNEAELK IRWLPLPKAM AWLAICVIAI
GLMTRYIDPV FAVLTRVAVA IMQMLGLQVT MPVLQPDAFP FWDSCMMVLS IVAMILMTRK
YVENWLLWVI INVISVVIFA LQGVYAMSLE YLILTFIAVN GSRLWINSAR ERGSRALSR