Gene SeD_A0843 details

Gene Information

• Locus tag: SeD_A0843
• Symbol: tolA
• ID: 6873023
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 839425
• End bp: 840603
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 642784038
• Product: cell envelope integrity inner membrane protein TolA
• Protein accession: YP_002214717
• Protein GI: 198244347
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3064] Membrane protein involved in colicin uptake
• TIGRFAM ID: [TIGR02794] TolA protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0151621
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 68
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCAAAGG CAACCGAACA AAACGACAAG CTCAAACGGG CGATAATTAT TTCAGCCGTG 
CTGCATATCA TCTTATTTGC AGTGCTGATC TGGAGTTCGT TTGATGAGCA TATAGAGGCT 
TCTGCCGGCG GCGGCGGTGG TTCCGCTATC GACGCGGTGA TGGTCGATCC TGGCGCCGTT 
GTGCAGCAGT ACAACCGTCA GCAGGATCAA CAGGCCAGCG CCAGACGCGC GGAAGAAGAG 
CGTAAAAAGC TGCAACAGCA GCAAGCAGAG GAGCTGCAGC AGAAGCAGGC TGCCGAACAG 
GAGCGGTTGA AACAACTTGA GAAAGAACGT TTAGCGGCTC AGGAGCAGCA AAAGCAGGCT 
GAAGAAGCGG CAAAACTGGC GCAACAGCAG CAGCAACAGG CCGAAGAAGC GGCGAAAGCG 
GCGGCGGACG CGAAGAAAAA AGCGGAGGCC GAAGCGGCGA AAGCGGCGGC GGACGCGAAG 
AAGAAAGCGG AGGCCGAAGC GGCGAAAGCG GCGGCGGACG CGAAGAAGAA AGCGGAAGCC 
GAGGCGGTAA AAGCGGCAGC GGACGCGAAG AAGAAAGCGG AAGCCGAAGC GGCGAAAGCG 
GCGGCGGAGG CGAAGAAGAA AGCGGAAGCC GAAGCGGCGA AAGCGGCGGC GGAGGCGAAG 
AAGAAAGCGG ATGCCGAGGC GGCGAAAGCG GCGGCGGAGG CGAAGAAGAA AGCGGATGCC 
GCGGCGGCGA AAGCAGCGGC GGACGCTAAG AAGAAAGCGG CTGCCGAAAA AGCGGCCGCC 
GCAGAAGGCG TCGACGATCT GCTTGGCGAT CTCAGCTCGG GTAAGAATGC GCCGAAAACC 
GGCGGCGGCG CGAAAGGGAA TGGTCAGCCA TCGAAAGATA GCGGTACATC GGGCGCTAAC 
GGTGGGGCGA CAGGCGCTGA TATCAGCGCC TACGCGAAAC AGATTCAGGT CGCCATTCAG 
AGCCGTCTGT ATGATGCGAG CCTGTATCAG GGCAAACAAT GTGTCTTGCA TATTAGCCTG 
GCGCCGGATG GCTCATTAAA AAGCATTACG TCTGAGGGCG GCGATCCGGC GCTTTGTCAG 
GCGGCGTTAA TGGCGGCAAA AACCGCGAAA ATTCCTAAAC CGCCAAGCCA GGCTGTTTAT 
GAGAAAATAA AGGATGCCAA ACTAGACTTT AAACTGTAG 

 

Protein sequence

MSKATEQNDK LKRAIIISAV LHIILFAVLI WSSFDEHIEA SAGGGGGSAI DAVMVDPGAV 
VQQYNRQQDQ QASARRAEEE RKKLQQQQAE ELQQKQAAEQ ERLKQLEKER LAAQEQQKQA 
EEAAKLAQQQ QQQAEEAAKA AADAKKKAEA EAAKAAADAK KKAEAEAAKA AADAKKKAEA 
EAVKAAADAK KKAEAEAAKA AAEAKKKAEA EAAKAAAEAK KKADAEAAKA AAEAKKKADA 
AAAKAAADAK KKAAAEKAAA AEGVDDLLGD LSSGKNAPKT GGGAKGNGQP SKDSGTSGAN 
GGATGADISA YAKQIQVAIQ SRLYDASLYQ GKQCVLHISL APDGSLKSIT SEGGDPALCQ 
AALMAAKTAK IPKPPSQAVY EKIKDAKLDF KL