Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0841 |
Symbol | tolQ |
ID | 6872580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 838236 |
End bp | 838928 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784036 |
Product | colicin uptake protein TolQ |
Protein accession | YP_002214715 |
Protein GI | 198242904 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000287891 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.682306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGACA TGAATATCCT TGATTTGTTC CTGAAGGCAA GCCTTCTGGT TAAACTTATC ATGTTGATTT TGATTGGTTT TTCAATAGCA TCCTGGGCCA TCATTATCCA GCGAACGCGT ATTCTGAACG CCGCTGCGCG TGAGGCGGAA GCGTTTGAAG ATAAATTCTG GTCCGGAATC GAACTATCGC GTCTGTACCA GGAAAGCCAG GGGAGGCGCG ATAGTCTGTC GGGCTCGGAA CAAATCTTTT ATAGCGGGTT CAAAGAGTTT GTCCGGCTCC ATCGCGCCAA CAGCCATGCG CCGGAGGCAG TGGTAGAGGG GGCGTCGCGT GCGATGCGCA TCTCCATGAA CCGAGAGCTG GAAACGCTGG AAACGCATAT CCCGTTTCTT GGCACGGTAG GCTCAATCAG TCCTTATATC GGTCTGTTTG GCACCGTATG GGGGATTATG CATGCGTTTA TCGCCCTGGG CGCGGTGAAA CAGGCGACTC TGCAAATGGT TGCGCCGGGT ATTGCCGAAG CATTGATTGC CACGGCGATT GGTCTGTTTG CCGCCATCCC TGCGGTTATG GCTTACAACC GACTGAATCA GCGCGTGAAC AAGCTGGAAC TGAATTACGA CAACTTTATG GAAGAGTTCA CCGCGATTCT GCACCGCCAG GCGTTTACCG TAAGCGAAAG CAACAAGGGG TAA
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Protein sequence | MTDMNILDLF LKASLLVKLI MLILIGFSIA SWAIIIQRTR ILNAAAREAE AFEDKFWSGI ELSRLYQESQ GRRDSLSGSE QIFYSGFKEF VRLHRANSHA PEAVVEGASR AMRISMNREL ETLETHIPFL GTVGSISPYI GLFGTVWGIM HAFIALGAVK QATLQMVAPG IAEALIATAI GLFAAIPAVM AYNRLNQRVN KLELNYDNFM EEFTAILHRQ AFTVSESNKG
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