| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0837 |
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| Symbol | cydB1 |
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| ID | 6872887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 836046 |
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| End bp | 837185 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642784032 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_002214711 |
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| Protein GI | 198244832 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.220414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.827493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGATT ATGAAGTACT ACGTTTTATC TGGTGGCTGC TGGTTGGCAT TTTGCTAATT
GGTTTCGCCG TCACCGATGG GTTCGACATG GGGGTGGGGA TGCTCACCCG TTTCCTCGGT
CGTAACGACA CCGAACGTCG AATTATGATT AACTCTATCG CCCCACACTG GGACGGTAAC
CAGGTGTGGT TGATCACCGC GGGCGGTGCG TTGTTTGCTG CCTGGCCGAT GGTTTACGCC
GCGGCGTTCT CCGGTTTCTA TGTAGCGATG ATCCTGGTGC TGGCGTCTTT GTTCTTCCGT
CCGGTCGGTT TTGATTACCG TTCCAAGATT GAGGACCCGC GCTGGCGCAA CATGTGGGAC
TGGGGCGTGT TCATCGGTAG CTTTGTGCCG CCGCTGGTGA TTGGCGTGGC CTTTGGCAAC
CTGTTGCAGG GCGTACCGTT CCACGTGGAT GAGTATCTGC GTCTGTACTA CACCGGTAAC
TTCTTCCAGT TGCTGAACCC GTTTGGTCTG CTGGCGGGTA TCGTAAGCGT AGGGATGATC
ATCACGCAGG GGGCGACTTA CCTGCAAATG CGCACCGTTG GCGAACTGCA CCTGCGCGCG
CGCGCCACCT CGCAGATTGC GGCGCTGGTG ACATTAGTGT GCTTTGCGCT GGCGGGCGTT
TGGGTAATGT ATGGTATTGA TGGTTATGTC GTGACATCCG CGATTGACCA TCATGCCGCC
TCTAACCCGC TGACTAAAGA AGTGGCGCGT GAAGCTGGCG CCTGGCTGGT GAACTTTAAT
AATGCTCCGA TCCTGTGGTT GGTTCCGGCT CTGGGCGTGG TTCTGCCGCT GCTGACTATC
CTGACTTCCC GTATGGAGAA AGGCGCGTGG GCATTCCTGT TCTCTTCGCT GACCCTGGCC
TGCATTATTC TGACGGCGGG TATCGCTATG TTCCCATTTG TGATGCCGTC CAGCACGATG
ATGAATGCCA GCCTGACCAT GTGGGATGCG ACATCCAGCC AGATGACGCT GAACCTGATG
ACCTGGGTTG CGGCGGTGTT CGTACCGATC ATTCTGATCT ACACCAGCTG GTGTTACTGG
AAAATGTTCG GTCGTATCAC TAAAGAACAT ATTGAAAGCA ACACCCACTC TCTGTACTAA
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| Protein sequence | MIDYEVLRFI WWLLVGILLI GFAVTDGFDM GVGMLTRFLG RNDTERRIMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYA AAFSGFYVAM ILVLASLFFR PVGFDYRSKI EDPRWRNMWD
WGVFIGSFVP PLVIGVAFGN LLQGVPFHVD EYLRLYYTGN FFQLLNPFGL LAGIVSVGMI
ITQGATYLQM RTVGELHLRA RATSQIAALV TLVCFALAGV WVMYGIDGYV VTSAIDHHAA
SNPLTKEVAR EAGAWLVNFN NAPILWLVPA LGVVLPLLTI LTSRMEKGAW AFLFSSLTLA
CIILTAGIAM FPFVMPSSTM MNASLTMWDA TSSQMTLNLM TWVAAVFVPI ILIYTSWCYW
KMFGRITKEH IESNTHSLY
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