Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A0824 |
Symbol | |
ID | 6873423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 819702 |
End bp | 820748 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642784019 |
Product | hypothetical protein |
Protein accession | YP_002214698 |
Protein GI | 198244644 |
COG category | [R] General function prediction only |
COG ID | [COG3180] Putative ammonia monooxygenase |
TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.2961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATTC TGCAGTGGTT TTTGTTGTTC CTGTTATCGC TGCTCATTTC CCTTATTTTT CTCTGGCTGC ACCTTCCGGC GGCGATGCTG CTCGGTCCAA TGATTGCGGG TATCGTGTTG AGTTTGCGAG GTAGTACGCT ACAACTTCCG CGCGGTATTT TTCTCGCCGC GCAGGCGATT CTCGGCTGTA TGATCGCCCA AAATCTAACC GGTTCGATAT TGACCACCCT CGCCCTCTAC TGGCCGGTCG TGCTTTTAGT GTTGCTGGTG ACGCTGCTTT CCAGCGCGAT AGTCGGCTGG CTGCTGGTAC GCTACAGCTC GCTGCCCGGC AACACCGGCG CATGGGGGTC TTCGCCGGGC GGCGCGGCGG CAATGGTAGC GATGGCGCAA GATTACGGGG CGGATATCCG CCTGGTGGCG TTTATGCAGT ATCTACGGGT ACTGTTTGTG GCTGGCGCGG CGGTGCTGGT GACACGCCTG ATACTCGGCG ACAGCGCGGC AGCGGTCAGC CAACAGGTGA TCTGGTTTCC ACCGCTTAGC GGTAATTTAT TGACGACGCT GCTATTAGCG ATCGTGGCGG GCATTGCCGG TCGCCTGTTG CGTATCCCTT CCGGCACGAT GCTGCTCCCC ATGTTGGCAG GCGCGATTCT CCATTCGCAA GGCATCATTG AAATTGAATT ACCCGAATGG CTGCTGGCCG TGGCGTATAT GGCGATAGGC TGGCGTATTG GGCTGGGTTT TGACAGACAG GTGTTTTTTA TGGCGCTGCG GCCATTGCCG CAAATCTTAT TGTCAATTTT CGCGCTGATG GCGATTTGCG CCGCGATGGC GTGGGGAATG GCTTACTACA TGCAGATTGA TTTTATGACG GCTTATCTCG CCACCAGTCC CGGTGGTCTG GATACGGTTG CCGCGATCGC GGCAGGAAGC AGTGCCGATA TGGCGCTCAT CATGGCAATG CAAACCCTAC GGCTGTTCAG CATTCTGTTA ACTGGGCCAG CAGTGGCCCG TTTTATATCA ACCTATGCGC CCAGACAACC TTTGTAG
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Protein sequence | MPILQWFLLF LLSLLISLIF LWLHLPAAML LGPMIAGIVL SLRGSTLQLP RGIFLAAQAI LGCMIAQNLT GSILTTLALY WPVVLLVLLV TLLSSAIVGW LLVRYSSLPG NTGAWGSSPG GAAAMVAMAQ DYGADIRLVA FMQYLRVLFV AGAAVLVTRL ILGDSAAAVS QQVIWFPPLS GNLLTTLLLA IVAGIAGRLL RIPSGTMLLP MLAGAILHSQ GIIEIELPEW LLAVAYMAIG WRIGLGFDRQ VFFMALRPLP QILLSIFALM AICAAMAWGM AYYMQIDFMT AYLATSPGGL DTVAAIAAGS SADMALIMAM QTLRLFSILL TGPAVARFIS TYAPRQPL
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