Gene SeD_A0824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0824 
Symbol 
ID6873423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp819702 
End bp820748 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content57% 
IMG OID642784019 
Producthypothetical protein 
Protein accessionYP_002214698 
Protein GI198244644 
COG category[R] General function prediction only 
COG ID[COG3180] Putative ammonia monooxygenase 
TIGRFAM ID[TIGR03082] membrane protein AbrB duplication 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.2961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATTC TGCAGTGGTT TTTGTTGTTC CTGTTATCGC TGCTCATTTC CCTTATTTTT 
CTCTGGCTGC ACCTTCCGGC GGCGATGCTG CTCGGTCCAA TGATTGCGGG TATCGTGTTG
AGTTTGCGAG GTAGTACGCT ACAACTTCCG CGCGGTATTT TTCTCGCCGC GCAGGCGATT
CTCGGCTGTA TGATCGCCCA AAATCTAACC GGTTCGATAT TGACCACCCT CGCCCTCTAC
TGGCCGGTCG TGCTTTTAGT GTTGCTGGTG ACGCTGCTTT CCAGCGCGAT AGTCGGCTGG
CTGCTGGTAC GCTACAGCTC GCTGCCCGGC AACACCGGCG CATGGGGGTC TTCGCCGGGC
GGCGCGGCGG CAATGGTAGC GATGGCGCAA GATTACGGGG CGGATATCCG CCTGGTGGCG
TTTATGCAGT ATCTACGGGT ACTGTTTGTG GCTGGCGCGG CGGTGCTGGT GACACGCCTG
ATACTCGGCG ACAGCGCGGC AGCGGTCAGC CAACAGGTGA TCTGGTTTCC ACCGCTTAGC
GGTAATTTAT TGACGACGCT GCTATTAGCG ATCGTGGCGG GCATTGCCGG TCGCCTGTTG
CGTATCCCTT CCGGCACGAT GCTGCTCCCC ATGTTGGCAG GCGCGATTCT CCATTCGCAA
GGCATCATTG AAATTGAATT ACCCGAATGG CTGCTGGCCG TGGCGTATAT GGCGATAGGC
TGGCGTATTG GGCTGGGTTT TGACAGACAG GTGTTTTTTA TGGCGCTGCG GCCATTGCCG
CAAATCTTAT TGTCAATTTT CGCGCTGATG GCGATTTGCG CCGCGATGGC GTGGGGAATG
GCTTACTACA TGCAGATTGA TTTTATGACG GCTTATCTCG CCACCAGTCC CGGTGGTCTG
GATACGGTTG CCGCGATCGC GGCAGGAAGC AGTGCCGATA TGGCGCTCAT CATGGCAATG
CAAACCCTAC GGCTGTTCAG CATTCTGTTA ACTGGGCCAG CAGTGGCCCG TTTTATATCA
ACCTATGCGC CCAGACAACC TTTGTAG
 
Protein sequence
MPILQWFLLF LLSLLISLIF LWLHLPAAML LGPMIAGIVL SLRGSTLQLP RGIFLAAQAI 
LGCMIAQNLT GSILTTLALY WPVVLLVLLV TLLSSAIVGW LLVRYSSLPG NTGAWGSSPG
GAAAMVAMAQ DYGADIRLVA FMQYLRVLFV AGAAVLVTRL ILGDSAAAVS QQVIWFPPLS
GNLLTTLLLA IVAGIAGRLL RIPSGTMLLP MLAGAILHSQ GIIEIELPEW LLAVAYMAIG
WRIGLGFDRQ VFFMALRPLP QILLSIFALM AICAAMAWGM AYYMQIDFMT AYLATSPGGL
DTVAAIAAGS SADMALIMAM QTLRLFSILL TGPAVARFIS TYAPRQPL