Gene SeD_A0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0822 
Symbol 
ID6872746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp818000 
End bp818734 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content60% 
IMG OID642784017 
ProductLamB/YcsF family protein 
Protein accessionYP_002214696 
Protein GI198243802 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0506032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTG ATTTAAATGC GGATGTGGGC GAAGGCTGCG CCAGCGACAG CGAATTATTA 
ACGCTGGTCT CCTCCGCCAA TATCGCCTGT GGTTTTCACG CCGGTGATGC GCAAACCATG
CTGACCAGCG TGCGCGAGGC GCTGAAAAAC GGCGTGGCGA TCGGCGCGCA TCCCAGCTTT
CCGGATCGGG ATAATTTTGG GCGGACGGCG ATGGCTTTGC CGCCGGAAAC GGTATACGCC
CAGACGCTGT ACCAAATCGG CGCGCTGGGG GCGATTGTTC AGGCGCAAGG CAGCGTGATG
CGCCATGTCA AACCGCACGG TATGCTCTAT AACCAGGCGG CGAAAGATCC CCATCTGGCA
CAGGCGATTG CGAAAGCGGT ACACGACTAT GATCCGTCAC TGATACTGGT TGGACTGGCG
GGAAGTGAGC TGATCCGGGC CGGTGAGCGC CATCGCCTGG TGACGCGGCA GGAGGTGTTT
GCCGATCGCG GCTATCAGGC CGACGGTAGC CTGGTGCCGC GCATGCAACC TGGCGCGCTG
ATTCACGACG AAGAGCAGGC GCTGGCGCAA ACGCTGGATA TGGTACAAGC CGGGAGAGTG
AAAAGCGTTA CTGGCGTGTG GACGACTGTC ACGGCGCAAA CGGTGTGCAT TCATGGCGAC
GGCGAGTATG CGCTTGCATT CGCTCGCAGG TTACGCGCCG CGTTCAATGC GCGTAATATA
CACGTTATTG CCTGA
 
Protein sequence
MNIDLNADVG EGCASDSELL TLVSSANIAC GFHAGDAQTM LTSVREALKN GVAIGAHPSF 
PDRDNFGRTA MALPPETVYA QTLYQIGALG AIVQAQGSVM RHVKPHGMLY NQAAKDPHLA
QAIAKAVHDY DPSLILVGLA GSELIRAGER HRLVTRQEVF ADRGYQADGS LVPRMQPGAL
IHDEEQALAQ TLDMVQAGRV KSVTGVWTTV TAQTVCIHGD GEYALAFARR LRAAFNARNI
HVIA