| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0809 |
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| Symbol | speF |
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| ID | 6873956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 800998 |
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| End bp | 803196 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784004 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_002214683 |
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| Protein GI | 198245384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAT TAAAAATTGC CGTTAGCCGT CATTGCCCGG ATTGTTTTTC TACACACCGT
AATATTGTAA ATGTTGATGA GAGTCGTTTC ATCGACGTGG CTGCCATCGT GTTATCCATC
GACGACATTG AACACGGAAA ACTCGATGAA ATCGACGCAA CGGGTTACGG TATTCCCGTG
TTTGTCGCGA CTCATGACGA AGGGCGCGTA CCGCCTGAGT ATTTGCCGCG TATCTCTGGT
GTATTCGAAT ATAATGAATC CCGTACTGCC TTCTATGGCC GCCAGTTGGA AACCGCAGCA
AGCCACTACG AAACGCAGTT ACGTCCGCCG TTTTTCCGCG CGCTGGTGGA TTATGTCAAC
CAGGGCAACA GCGCATTTGA CTGCCCGGGA CATCAGGGCG GCGAATTCTT CCGCCGTCAT
CCTGCCGGTA ATCAGTTCGT GGAATACTTT GGCGAAACGC TCTTCCGCTC CGACCTATGC
AACGCGGACG TGGCGATGGG CGATCTGCTG ATTCACGAAG GCGCGCCTTG CATTGCGCAG
CAACATGCGG CGAAAGTCTT TAACGCCGAT AAGACCTACT TTGTGCTGAA CGGGACCTCC
TCCTCTAACA AAGTCGTACT CAACGCGCTG TTAACGCCGG GCGATCTGGT ACTGTTTGAC
CGTAACAACC ACAAATCTAA CCACCACGGC GCATTATTGC AGGCGGGCGC AACGCCAGTT
TATCTGGAAA CCGCGCGTAA CCCGTATGGT TTTATCGGCG GGATCGACGC TCACTGCTTC
GAAGAAGATT ACCTGCGCGA GCTGATTAGC GAAGTCGCGC CGCAGCGTGC CCGCGAAGCA
CGTCCATTCC GTCTGGCCGT CATCCAGTTA GGCACCTACG ACGGTACCAT TTATAACGCC
CGTCAGGTCG TCGATAAAAT TGGTCATCTG TGCGACTACA TCCTGTTTGA CTCCGCCTGG
GTCGGCTATG AACAATTTAT TCCGATGATG GCCGATTGTT CGCCGCTGCT GCTGGAACTG
AACGAAAACG ATCCGGGTAT TCTGGTGACG CAGTCCGTTC ACAAACAACA AGCCGGTTTC
TCCCAGACCT CGCAGATCCA TAAAAAAGAT AGCCATATCA AAGGGCAATC GCGCTACGTT
CCGCATAAGC GCATGAACAA CGCCTTTATG ATGCACGCCT CCACCAGCCC GTTCTATCCG
CTGTTCGCTG CGCTGGACGT TAACGCCAAA ATGCACGAAG GCGTCAGCGG TCGCAATATG
TGGATGGATT GCGTGGTTAA CGGCATCGAT GCCCGTAAAT TGATCCTCGA AAACTGTCAT
CACATCCGTC CGTTCGTACC GGAACTGATT GATGGTAAGC CGTGGCAGTC ATACCCGACG
TCAGAGATCG CCAGCGATCT GCGCTTCTTC CACTTCGTTC CGGGAGAACA CTGGCATGCG
TTTGAAGGCT ATGCCGAACA TCAGTACTTT GTCGACCCTT GCAAACTGCT GCTCACCACA
CCGGGCATTA ATGCAGCGAG CGGCGAATAT GAAGACTTTG GCGTTCCTGC CACGATCCTC
GCCAACTTCC TGCGCGAGAA CGGCGTTGTG CCGGAAAAAT GCGACCTCAA CTCCATTCTG
TTCCTGCTGA CGCCGGCAGA AGACATGGCG AAGTTACAAC AGCTTGTCGC CCTGCTGGCT
CGTTTCGAAA AACTGCTGGA AGCTGATGCG CCGTTAGCGG AAGTATTACC GTCCATCTAC
AAACAGCATG AAGCGCGTTA TGCCGGCTAT ACCCTGCGTC AGCTTTGCCA GGAGATGCAC
GATCTCTATG CGCGGCACAA CGTGAAACAG CTGCAAAAAG AGATGTTCCG TAAATCGCAT
TTCCCGAAAG TCAGTATGAA TCCGCAAGAG GCCAACTATG CCTATCTGCG CGGCGAGGTC
GAACTGGTTC GCCTGCCGGA AGCGGAAGGT CGTATCGCGG CTGAAGGCGC TCTGCCTTAC
CCGCCGGGAG TGCTGTGTGT AGTTCCGGGT GAAATCTGGG GCGGTTCTGT CCTGCGTTAC
TTCAGCGCCC TGGAAGAAGG GATCAACCTG CTGCCGGGCT TTGCGCCTGA ACTGCAGGGC
GTTTATATCG AAGAACACGA CGGCCGTAAG CAGGTCTGGT GCTACGTCAT TAAACCTCGT
GACGCGCAGC GCTCCCTGCT GAAGGAGGAA AAATTATGA
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| Protein sequence | MSELKIAVSR HCPDCFSTHR NIVNVDESRF IDVAAIVLSI DDIEHGKLDE IDATGYGIPV
FVATHDEGRV PPEYLPRISG VFEYNESRTA FYGRQLETAA SHYETQLRPP FFRALVDYVN
QGNSAFDCPG HQGGEFFRRH PAGNQFVEYF GETLFRSDLC NADVAMGDLL IHEGAPCIAQ
QHAAKVFNAD KTYFVLNGTS SSNKVVLNAL LTPGDLVLFD RNNHKSNHHG ALLQAGATPV
YLETARNPYG FIGGIDAHCF EEDYLRELIS EVAPQRAREA RPFRLAVIQL GTYDGTIYNA
RQVVDKIGHL CDYILFDSAW VGYEQFIPMM ADCSPLLLEL NENDPGILVT QSVHKQQAGF
SQTSQIHKKD SHIKGQSRYV PHKRMNNAFM MHASTSPFYP LFAALDVNAK MHEGVSGRNM
WMDCVVNGID ARKLILENCH HIRPFVPELI DGKPWQSYPT SEIASDLRFF HFVPGEHWHA
FEGYAEHQYF VDPCKLLLTT PGINAASGEY EDFGVPATIL ANFLRENGVV PEKCDLNSIL
FLLTPAEDMA KLQQLVALLA RFEKLLEADA PLAEVLPSIY KQHEARYAGY TLRQLCQEMH
DLYARHNVKQ LQKEMFRKSH FPKVSMNPQE ANYAYLRGEV ELVRLPEAEG RIAAEGALPY
PPGVLCVVPG EIWGGSVLRY FSALEEGINL LPGFAPELQG VYIEEHDGRK QVWCYVIKPR
DAQRSLLKEE KL
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