Gene SeD_A0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0797 
Symbol 
ID6870986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp790345 
End bp791484 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content57% 
IMG OID642783992 
Productcitrate utilization protein B 
Protein accessionYP_002214671 
Protein GI198242391 
COG category 
COG ID 
TIGRFAM ID[TIGR02484] CitB domain protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC TTGAAAAATT AATCATTGAG GCCACCGTGC TTACCGAACC GGAAGCCGAG 
GTCGAACGCG TCATGCAAGT GTGTAACGCG TGTCGCTACT GCGAAGGTTT TTGCGCGGTA 
TTTCCGGCGA TGACCCAGCG GCTCGAATTC GGTAAAGCCG ATATTCATTA TCTGGCGAAT 
TTATGTCATA ACTGCGGCGC CTGCCTGCAC GCATGCCAGT ATGCGCCGCC CCATGAATTT 
GCCATTAACG TGCCGAAAGC GATGGCGCAA GCCCGCCTGG AGACGTATCA ACAGTATGCC 
CAGCCCGCCG CTTTTGGCGC GTTATACCGC CGGGCGGGGA TCACCGTCGC GCTGGCGCTG 
ATAGTCGGTC TGACGCTCTT TTTATTACTG GCGATGGCGC TGAAAGGGTC GCTGATTCAT 
CCGCCGCTGG CCGGTGACTT CTATCAAATT TTTCCGCATA GCCTGCTGGC ATGGATGTTT 
GGCTCAGTTT TTGTGCTGGC AATCGGTTTG CTTATGGCGG GCGTAATTCG CTTCTGGCGT 
GAGATCTCGC CGGGCGTACC GCGTTCGGCA GAGATTGCGG AAGCGTCGCA CAATGCGTTA 
ACGCTGAAAT ATCTCGACGG CGGTCACGGC AAAGGCTGTA ACGAAGCGGA CGATGCGTTC 
ACGCTGCTGC GCCGTCGCTT TCATCACTTT ACCTTTTACG GTTTTATGCT CTGTTTTGCC 
GCCACGGTCG TGGCGACGGG CTATCACTAC GTCGCCGGTT GGGAAGCGCC CTACCCGTTT 
TTTAGCCTGC CGGTCATGCT CGGCACGCTG GGCGGTATCG GTCTGCTTAT CGGCCCGGCC 
GGGCTACTGT GGCTCAATCT GCGGCGGTCG CCGTTACATG GCGATGCGCG CCAGAAACCC 
ATGGATCGCG GCTTTATTCT GCTGCTGTTC TTAACCAGTC TGACCGGGCT GGCGCTGCTG 
GCAGGCAGAG ACACCAGCGG AATGGGCATA CTGCTGGCGC TCCATTTAGG CGTGGTGATG 
GCGCTCTTTC TCACCCTTCC CTACGGAAAA TTCGCCCACG GATTTTTCCG CTGCGCGGCC 
TTACTCAAAT GGGCAGTTGA GAAGCGACGC GGAAAACATG CGGGGGATAC AGGCAACTGA
 
Protein sequence
MKQLEKLIIE ATVLTEPEAE VERVMQVCNA CRYCEGFCAV FPAMTQRLEF GKADIHYLAN 
LCHNCGACLH ACQYAPPHEF AINVPKAMAQ ARLETYQQYA QPAAFGALYR RAGITVALAL 
IVGLTLFLLL AMALKGSLIH PPLAGDFYQI FPHSLLAWMF GSVFVLAIGL LMAGVIRFWR 
EISPGVPRSA EIAEASHNAL TLKYLDGGHG KGCNEADDAF TLLRRRFHHF TFYGFMLCFA 
ATVVATGYHY VAGWEAPYPF FSLPVMLGTL GGIGLLIGPA GLLWLNLRRS PLHGDARQKP 
MDRGFILLLF LTSLTGLALL AGRDTSGMGI LLALHLGVVM ALFLTLPYGK FAHGFFRCAA 
LLKWAVEKRR GKHAGDTGN