Gene SeD_A0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0753 
Symbol 
ID6875357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp749650 
End bp750876 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content52% 
IMG OID642783953 
ProductUxaA family hydrolase 
Protein accessionYP_002214639 
Protein GI198245400 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.371457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAAAG TGAACGCGGA CGTGGTGACT GGAAATAATA TAAAACAAGG GAAAATGATT 
ATGAGCAATG AGACTTTTTT GGGGTTCCGC CGCCCTGACG GCCGTTTTGG CATCCGTAAT 
TATGTACTGA TTTTACCTAC CAGCGTTTGT GCGAATAAAG TCGCCCGGGA TATTGCCCGG 
CAGGTAAAAG GCGCGACATG GGTGAATAAC GATTTTGGCT GCTGCCAGGT AGCAGGCGAT 
GCGCGTCTGA CGGAAAAGAC ATTGATTAAT GTGGCGAATA ATCCCAACGT CGGCGCTATT 
GTGGTTGTGG GCTTAGGCTG TGAAGGCGCG GAGCCGCTGC GCATCGCAGA AGAGATTACC 
GCATTTGGCA AACCGACTTC CTGCATTACC ATTCAGGAAG AGGGCGGCAC GCTTAAATGT 
CAGGCCAGGG GGATTTCGCT GGCCCGCGAC TATGCGCAAC AACTCTCCAT GCAAAAACCG 
CAGCAAGCAC CGGTTAGCGA GCTGCTGCTG GCGATGGAGT GCGGCGGGTC AGATACGACA 
TCGGGGCTGG CGTCTAACCC TTCCTGCGGG GTCGCCTCGG ATAAGCTGAT ACGCTGTGGC 
GGAAGCTCAA TTCTTTCTGA AACGACGGAA TTTATTGGCG CCGAGCATGT GATGGCGAAA 
CGCGCGGTGA CGCCGGAGGT TGGTCAACAG CTCATTGATT TAGTGGTCGG CTGCGAGGCG 
CGAGCAAAAG CGCTGGGCGA GGATATTCGC GGGGGACAGC CGACGCCGGG CAATATTAAA 
GGCGGGCTGA CTACCATTGA AGAAAAATCG TTAGGCTGTA TGCATAAAGC AGGCCATGCG 
CCGTTACAGG GCGTCCTGGA ATATGCCGAT AGTCCAACGC ATCCGGGCCT GTGGATTATG 
GATACCCCGG GGCAGGATAT TGAATCTATT TCCGGCATGG TGGCGGGTGG AGCGCAGATC 
GTTATTTTTA CTACCGGTCG CGGAACGCCT GCCGGTAACC CAATAGCGCC GGTAATAAAA 
ATTACGGGTA ATAAAGCAAC GTGGGAAATG ATGCAGGACA ATATTGATAT TGATGTGTCC 
GCCATTATGT CTGGCGAGGC TTCTATTACG CAAATGGGCG AGGAAATTTA TCAGGAAATT 
TTACGCGTCG CGAATGGGAA AACGACTAAA TCAGAAGATT TAGGTCATAA CGAATTCTCT 
ATTTATAAGA TCGCGCCGAC GTTCTGA
 
Protein sequence
MWKVNADVVT GNNIKQGKMI MSNETFLGFR RPDGRFGIRN YVLILPTSVC ANKVARDIAR 
QVKGATWVNN DFGCCQVAGD ARLTEKTLIN VANNPNVGAI VVVGLGCEGA EPLRIAEEIT 
AFGKPTSCIT IQEEGGTLKC QARGISLARD YAQQLSMQKP QQAPVSELLL AMECGGSDTT 
SGLASNPSCG VASDKLIRCG GSSILSETTE FIGAEHVMAK RAVTPEVGQQ LIDLVVGCEA 
RAKALGEDIR GGQPTPGNIK GGLTTIEEKS LGCMHKAGHA PLQGVLEYAD SPTHPGLWIM 
DTPGQDIESI SGMVAGGAQI VIFTTGRGTP AGNPIAPVIK ITGNKATWEM MQDNIDIDVS 
AIMSGEASIT QMGEEIYQEI LRVANGKTTK SEDLGHNEFS IYKIAPTF