Gene SeD_A0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0736 
Symbol 
ID6871658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp733447 
End bp734400 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID642783937 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002214623 
Protein GI198244733 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.13566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGATA ATAATCAGGC AGAAAGACAA CCGGCCGATC AACACCTACA GGACAAACCG 
CAAATTTTCA GAACACTGAG AAATATTGAC CTCAATCTGT TGACGATTTT CGAGGCCGTA 
TATGTCCATA AAGGGATCGT CAATGCAGCG AAAATTCTTA ACCTGACGCC GTCAGCCATT 
AGCCAGTCCA TTCAAAAATT ACGGACTATA TTTCCCGATC CGCTGTTTAT TCGCAAAGGC 
CAGGGCGTAA CGCCCACGAC GTATGCTACG CATCTGCACG AATACATCAG CCAGGGGCTG 
GAATCTATTC TTGGCGCCCT GGATCTTACG GGCAGCTATG ATAAGCAACG CACCATTACA 
ATTGGCACGA CGCCTTCGGT CGGCGCGCTA GTGATGCCGA TTATTTACCA GGCCATCAGG 
CCGCGTTATC CTCAGCTTTT GCTGCGCAAC ATTCCGGTAG ACGATGCCGA AAGCCAGCTT 
AGCCAGTTTC AGACCGATCT CATTATCAAT ACCCATAGCT ATAACAACCG GAGCATCCAG 
CATCACGTCC TGTTTAGCGA TACGCTTGAG ATTGTCTGCC GCCAGCATCA CCCGTGTCTG 
GCGAACGCCA TTACTGAAGA GAGACTGAAC AGCGCGGATC ACACCTTTCT GATGCTGGAG 
GGACAACATC TTTCCCTCCT GCGCCAGCGA CTGCAGGAGA CATTTCCCGA TCAGCAAATC 
AGTTTTAGCA GCTACAATAT TTTTACCATT GCCTCGCTGA TCGCCAGCAG CGATCTGCTG 
GGACTGATGC CCACCCGCTT CTACGACTTA TTTAGCCGTT GCTGGCCGCT TGAACGCCTT 
CCCTACGCGC CGGTGAATAG TGAACAGGTC GAGTTCTCGC TGCATTACAA TAAACTGAGT 
CTGCGCGATC CGGTGCTGGA GAACGTCATT GATATCATCC GTGAGGCGTT CTGA
 
Protein sequence
MSDNNQAERQ PADQHLQDKP QIFRTLRNID LNLLTIFEAV YVHKGIVNAA KILNLTPSAI 
SQSIQKLRTI FPDPLFIRKG QGVTPTTYAT HLHEYISQGL ESILGALDLT GSYDKQRTIT 
IGTTPSVGAL VMPIIYQAIR PRYPQLLLRN IPVDDAESQL SQFQTDLIIN THSYNNRSIQ 
HHVLFSDTLE IVCRQHHPCL ANAITEERLN SADHTFLMLE GQHLSLLRQR LQETFPDQQI 
SFSSYNIFTI ASLIASSDLL GLMPTRFYDL FSRCWPLERL PYAPVNSEQV EFSLHYNKLS 
LRDPVLENVI DIIREAF