Gene SeD_A0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0732 
Symbol 
ID6873431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp731070 
End bp731858 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content56% 
IMG OID642783933 
Producthydrolase YbeM 
Protein accessionYP_002214619 
Protein GI198242270 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTTG CAGCCGGGCA GTTTGTGGTG AGTTCTGTAT GGGAAAAGAA TGCGCAAGTT 
TGCGTTTCGT TAATGGCTCA GGCGGCGGGC CGCGGCGTAT CGCTTCTGGT GCTGCCTGAG 
GGGATATTAG CGCGAGATGA CATCGACCTT GACCTGCCGA TTCGCGCCGC GCAGCCGCTG 
GATGGCGCGT TTATGACGCG GCTTCTGGAA GAAAGCGCTC ATAATAATAT GACGACGATA 
TTCACTATCC TTGTCCCGTC AACGCCTGGA CGGGCGGTTA ATATGCTGGT GGCGCTACGG 
GCGGGTCACA TTGTCGCGCG TTACGCGAAG CTGCATCTCT ATGATGCGTT TTCGATGCAA 
GAATCCCAAA GTATTGATGC CGGAACCGTT ATCGCGCCGG TGCTGGACGT GGAGGGGGTT 
AAGGTGGGGC TTATGACCTG TTATGACCTG CGCTTTCCGG ATATGGCGTT AGCGCTGGCT 
TTACAGGGGG CTGACGTATT GGCGCTGCCG ACGGGCTGGG TTCGCGGCCC GTTGAAAGAG 
CAGCAGTGGT CGACGCTGCT GGCGGCGAGA GCGCTGGATA CCACCTGCTA TCTGATTGCG 
GCCGGGGAGT GTGGTAATCG TAATATTGGT CAAAGTCGTA TTATCGATCC GTTGGGGGTA 
ACGATAGCCG CGGCAGCCGA TCGTCCGGCG CTGATCGTCG CGGAAATATT CAGAGAACGA 
ATAGACCAGG TGCGGGAGCA ACTTCCTCTT TTGCAGCAAC GACGATTTGC GCCACCGCAA 
TTATTATGA
 
Protein sequence
MFVAAGQFVV SSVWEKNAQV CVSLMAQAAG RGVSLLVLPE GILARDDIDL DLPIRAAQPL 
DGAFMTRLLE ESAHNNMTTI FTILVPSTPG RAVNMLVALR AGHIVARYAK LHLYDAFSMQ 
ESQSIDAGTV IAPVLDVEGV KVGLMTCYDL RFPDMALALA LQGADVLALP TGWVRGPLKE 
QQWSTLLAAR ALDTTCYLIA AGECGNRNIG QSRIIDPLGV TIAAAADRPA LIVAEIFRER 
IDQVREQLPL LQQRRFAPPQ LL