| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0728 |
|---|
| Symbol | dcuC |
|---|
| ID | 6872616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 727805 |
|---|
| End bp | 729235 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642783929 |
|---|
| Product | C4-dicarboxylate transporter DcuC |
|---|
| Protein accession | YP_002214615 |
|---|
| Protein GI | 198244831 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3069] C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00771] c4-dicarboxylate anaerobic carrier family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTCTTA TTTTTACTCT GGGTGTCGAT AAGACAGGGG AAACAATGCT AACAGTTATA
GAGCTCCTTA TCGGAGTCGT CGTTATTGTG GGTGTAGCGC GCTACATCAT TAAGGGATAT
TCCGCCACTG GCGTTTTATT TGTCGGCGGT CTGGCTCTGC TTATTATCAG CGCGCTGATG
GGGCATAAGG TATTACCTGC CAGCGAAACC AGTACCGGCT ATACCGCAAC AGATATTGTT
GAATACATCA AAATTTTGCT TATGAGTCGC GGCGGCGATC TTGGCATGAT GATCATGATG
CTGTGCGGCT TTGCCGCCTA TATGACGCAT ATCGGCGCGA ATGATATGGT CGTGAAGCTG
GCGTCGAAAC CTTTACAGTA CATAAACTCG CCCTACCTGT TGATGATTGC TGCCTATTTT
GTCGCCTGCC TGATGTCGCT GGCCGTCTCT TCCGCGACGG GGCTTGGCGT ACTGCTCATG
GCTACTCTCT TCCCGGTGAT GGTCAACGTC GGCATTAGCC GCGGCGCGGC GGCGGCTATT
TGCGCCTCTC CGGCCGCCAT CATCCTCTCG CCAACGTCTG GCGATGTGGT TTTAGCCGCA
AAAGCGGCGG AGATGCCGTT AATCGATTTC GCGTTCAAAA CCACGCTGCC GATTTCCATC
GCCGCAATTA TCGGTATGGC GATTGCGCAC TTTTTCTGGC AACGCTATCT GGATAAAAAA
GAGAACATTT CACATGAGAT GCTGGACGTG GCGGAGATTA CCACCACGGC CCCGGCGTTT
TATGCCCTTT TGCCGTTCAC GCCCATTATC GGCGTACTGA TTTTTGACGG TAAATGGGGG
CCGCAGTTGC ACATTATTAC CATCCTGGTG ATCTGTATGC TGCTGGCCGC CGTGCTGGAA
TTCGTGCGCG GCTTCAACAC GCAAAATGTG TTTTCCGGCC TGGAAGTGGC TTATCGCGGC
ATGGCGGATG CGTTTGCCGG CGTCGTGATG CTGCTGGTCT CGGCGGGCGT TTTCGCCCAG
GGGCTGAGCA CCATTGGCTT TATCCAAAGT CTGATCTCGA TTGCCACTTC TTTTGGCTCC
GCCAGCATTA TTCTGATGCT GGTCTTAGTG ATTTTAACCA TGCTGGCCGC GATGACCACC
GGTTCAGGCA ATGCGCCTTT TTACGCCTTT GTTGAGATGA TCCCTAAACT GGCGCACTCC
TCCGGTATCA ACCCAGCCTA TTTATCCATC CCAATGCTGC AAGCCTCAAA CCTGGGGCGC
ACGATTTCGC CGGTCTCCGG CGTCGTGGTC GCTGTCGCCG GGATGGCTAA AATATCACCG
TTTGAAGTGG TGAAGCGCAC GTCCGTTCCG GTCATCGTCG GTCTGTTGAT CGTCATTATC
GCCACGGAAA TTATGGTGCC AGGCGCCTCT TCCGCCGTTA CTGGCGGCTG A
|
|---|
| Protein sequence | MVLIFTLGVD KTGETMLTVI ELLIGVVVIV GVARYIIKGY SATGVLFVGG LALLIISALM
GHKVLPASET STGYTATDIV EYIKILLMSR GGDLGMMIMM LCGFAAYMTH IGANDMVVKL
ASKPLQYINS PYLLMIAAYF VACLMSLAVS SATGLGVLLM ATLFPVMVNV GISRGAAAAI
CASPAAIILS PTSGDVVLAA KAAEMPLIDF AFKTTLPISI AAIIGMAIAH FFWQRYLDKK
ENISHEMLDV AEITTTAPAF YALLPFTPII GVLIFDGKWG PQLHIITILV ICMLLAAVLE
FVRGFNTQNV FSGLEVAYRG MADAFAGVVM LLVSAGVFAQ GLSTIGFIQS LISIATSFGS
ASIILMLVLV ILTMLAAMTT GSGNAPFYAF VEMIPKLAHS SGINPAYLSI PMLQASNLGR
TISPVSGVVV AVAGMAKISP FEVVKRTSVP VIVGLLIVII ATEIMVPGAS SAVTGG
|
|---|
| |