| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A0681 |
|---|
| Symbol | |
|---|
| ID | 6875291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 678978 |
|---|
| End bp | 681233 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642783893 |
|---|
| Product | outer membrane receptor FepA |
|---|
| Protein accession | YP_002214579 |
|---|
| Protein GI | 198245596 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.757968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA AGATTCATTC CCTGACCTTA CTGGTCAATT TAGGGATTTA CGGGGCCGCT
CTGCCCGTGA TGGCGGAAGA AAAAACCGAT AGCGCTGCGC TCACCAATGA AGACACCATC
GTGGTGACCG CTGCCCAGCA AAACCTACAG GCGCCTGGCG TATCCACTAT CACCGCCGAT
GAGATCCGCA AAAATCCGCC CGCGCGCGAC GTGTCAGAAA TCATCCGCAC CATGCCGGGC
GTGAACCTGA CCGGCAACTC CACCAGCGGT CAGCGCGGGA ATAACCGCCA AATCGATATT
CGCGGCATGG GGCCGGAAAA CACCCTTATC CTGATAGACG GTAAACCCGT CACCAGCCGT
AACTCGGTGC GCCTGGGCTG GCGCGGCGAA CGCGATACCC GTGGCGATAC CGCGTGGGTG
CCGCCGGAGA TGATCGAACG CATTGAAGTG CTGCGTGGCC CTGCCGCCGC ACGCTACGGT
AACGGCGCGG CGGGTGGCGT GGTCAATATC ATTACCAAAA AAGGCGGTAG CGAGTGGCAC
GGTTCCTGGA ATACCTATTT CAACGCTCCG GAACATAAAG ACGAAGGCGC GACCAAACGC
ACTAACTTTA GCCTGAACGG CCCGCTGGGC GGGGATTTCA GCTTCCGCCT GTATGGCAAC
CTCGACAAAA CGCAGGCGGA TGCGCGTAAT ATTAACCAGG GGCATCAGTC TGAACGTACC
GGGAGTTACG CCGACACGCT ACCAGCAGGA CGCGAGGGGG TCATTAACAA AGATATCAAC
GGCGTGGTTC GTTGGGATTT TGCTCCGCTT CAGTCTCTGG AGCTGGAGGC CGGATACAGT
CGCCAGGGCA ATCTCTATGC CGGCGATACT CAGAACACCA ATACGAACCA ACTGGTGAAA
GATAATTACG GAAAAGAGAC GAACCGCCTC TATCGGCAGA ACTACTCTCT GACCTGGAAC
GGCGGCTGGG ATAATGGCGT AACCACCAGT AACTGGGTGC AATACGAACA TACCCGTAAC
TCCCGGATGC CGGAAGGCTT GGCAGGCGGC ACCGAAGGAA TTTTCGATCC CAAAGCATCG
CAAAAATATG CCGATGCCGA TTTGAATGAC GTCACCCTAC ACAGCGAAGT GAGCCTTCCT
TTCGATCTGC TGGTCAATCA AAACCTGACG CTGGGTACCG AATGGGCCCA ACAGCGTATG
AAAGACGAGC TCTCCAACTC GCAAACCTTT ATGGGGGGAA ATATCCCGGG TTACAGCAGT
ACCAATCGTA GCCCCTATTC AAAAGCGGAA ATTTTCTCTC TGTTTGCTGA AAACAACATG
GAACTGACCG ACAGCACCAT GCTGACGCCG GGGCTACGTT TCGATCATCA CAGTATTGTG
GGGGATAACT GGAGCCCGTC GCTGAACCTG TCGCAAGGTC TGGGGGATGA CTTTACCCTG
AAAATGGGGA TCGCCCGCGC TTATAAAGCC CCGAGTCTGT ACCAGACTAA CCCAAACTAT
ATTTTGTACA GTAAAGGTCA GGGTTGCTAC GCGACTGGCG CGGGTACCGG CATCGGCTGC
TATATGATGG GTAACGATGA TCTGAAAGCC GAAACCAGCA TCAATAAAGA GATCGGTCTG
GAATTTAAAC GCGATGGCTG GCTGGCCGGC ATCACCTGGT TCCGCAATGA TTACCGCAAT
AAGATTGAAG CGGGTACAGT GCCGTTGCAG CGTATCAATA ACGGCAAAAC GGATGTCTAT
CAGTGGGAGA ACGTGCCGAA AGCGGTCGTT GAAGGTCTGG AAGGCACGTT AAACGTACCG
GTTAGCGACA CCGTCAACTG GACGAATAAC GTTACGTATA TGCTGCAGAG TAAAAACAAA
GAGACCGGCG AACGCCTGTC GATTATTCCA CAGTACACGC TTAACTCTAC CCTGAGCTGG
CAGGTACGTC AGGACGTTTC TCTGCAATCG ACCTTCACCT GGTACGGCAA ACAAGAGCCG
AAGAAATATG ATTATCAGGG TAACCCCGTT ACCGGAACAG ATAAGCAAGC GGTCAGCCCA
TACAGTATTG TTGGCCTGAG CGCGACCTGG GACGTGACCA AAAATGTCAG CCTGACCGGT
GGCGTGGATA ACCTCTTTGA CAAACGTCTG TGGCGTGAAG GTAACGCGCA AACCGTCAGG
GATACGCAAA CTGGCGCTTA TATGGCGGGT GCTGGCGCGT ACACCTATAA CGAACCGGGA
CGTACGTGGT ATATGAGCAT TAATACCCAT TTCTGA
|
|---|
| Protein sequence | MNKKIHSLTL LVNLGIYGAA LPVMAEEKTD SAALTNEDTI VVTAAQQNLQ APGVSTITAD
EIRKNPPARD VSEIIRTMPG VNLTGNSTSG QRGNNRQIDI RGMGPENTLI LIDGKPVTSR
NSVRLGWRGE RDTRGDTAWV PPEMIERIEV LRGPAAARYG NGAAGGVVNI ITKKGGSEWH
GSWNTYFNAP EHKDEGATKR TNFSLNGPLG GDFSFRLYGN LDKTQADARN INQGHQSERT
GSYADTLPAG REGVINKDIN GVVRWDFAPL QSLELEAGYS RQGNLYAGDT QNTNTNQLVK
DNYGKETNRL YRQNYSLTWN GGWDNGVTTS NWVQYEHTRN SRMPEGLAGG TEGIFDPKAS
QKYADADLND VTLHSEVSLP FDLLVNQNLT LGTEWAQQRM KDELSNSQTF MGGNIPGYSS
TNRSPYSKAE IFSLFAENNM ELTDSTMLTP GLRFDHHSIV GDNWSPSLNL SQGLGDDFTL
KMGIARAYKA PSLYQTNPNY ILYSKGQGCY ATGAGTGIGC YMMGNDDLKA ETSINKEIGL
EFKRDGWLAG ITWFRNDYRN KIEAGTVPLQ RINNGKTDVY QWENVPKAVV EGLEGTLNVP
VSDTVNWTNN VTYMLQSKNK ETGERLSIIP QYTLNSTLSW QVRQDVSLQS TFTWYGKQEP
KKYDYQGNPV TGTDKQAVSP YSIVGLSATW DVTKNVSLTG GVDNLFDKRL WREGNAQTVR
DTQTGAYMAG AGAYTYNEPG RTWYMSINTH F
|
|---|
| |