Gene SeD_A0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0645 
Symbol 
ID6872461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp647013 
End bp647714 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content51% 
IMG OID642783861 
Productgp26 
Protein accessionYP_002214547 
Protein GI198242358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.193156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACC CGTCACTTAA TAATCCCGTC ATCATTCAGG CTCCTCGTCT TGATGCCTCA 
ATCCTCCCAC GCAACGTCTT CAGCCGGTCC TATCTGCTCT ACGTAATCGC GCAGGGGACT 
GACGTTGGCG CTATTGCGGG AAAGGCAAAC GAAGCAGGGC AAGGCGCCTA TGACGCGCAG 
GTAAAGAACG ATGAGCAGGA TGTTGAGCTT GCAGACCACG AAGAGAGAAT TCAACAGTTA 
CGCATTGACG TAGACGACCA TGAAATACGT ATTACTGCAA ATGCCAATGC AATTGCGGTA 
CTGGATGTCA GACTAACCAC GGCTGAAGGC AAAATAGTCA CCTTGCAGGC TGATGTCAGT 
GCTCTTGATG GTAGGGTTAC GGCTGCTGAA AGCACTATTT CTTCATTGCA GGCTGATTAC 
GTATCGAAGT CAGCAACTGC TTCTCAATCG CTGGCGTCAC CTCTCAACGT GACAACGTCC 
TATTCAGTTG GCGGCACTAA AGTTATCGGT GCGCGACAGG CAGGATGGAC AGCAGCAACC 
GGAACAGCAC TTCTCGGTGC ATTCAACGCT AACCAGGCAT ACACGGTCAG TGCCACATAT 
ACGCAGTCTG AGGTATCAGC TATGGCTACC GGATTGCAGC AGGCGCGACA GCGTATCAAA 
GCTCTCGAAG ATGCAATACG TACTCATGGA TTAATCAACT GA
 
Protein sequence
MADPSLNNPV IIQAPRLDAS ILPRNVFSRS YLLYVIAQGT DVGAIAGKAN EAGQGAYDAQ 
VKNDEQDVEL ADHEERIQQL RIDVDDHEIR ITANANAIAV LDVRLTTAEG KIVTLQADVS 
ALDGRVTAAE STISSLQADY VSKSATASQS LASPLNVTTS YSVGGTKVIG ARQAGWTAAT 
GTALLGAFNA NQAYTVSATY TQSEVSAMAT GLQQARQRIK ALEDAIRTHG LIN