Gene SeD_A0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0639 
Symbol 
ID6875038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp640152 
End bp642329 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content50% 
IMG OID642783855 
Productportal protein 
Protein accessionYP_002214541 
Protein GI198245102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.308579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ATGAAAACAG GCTGGAGAGT ATCCTGTCGC GCTTTGATGC GGACTGGACA 
GCCAGCGATG AAGCCAGAAG GGAGGCCAAG AATGATCTCT TCTTCTCCCG CGTATCTCAG
TGGGATGACT GGCTATCACA ATACACAACC CTGCAGTATC GCGGGCAGTT CGATGTTGTA
CGTCCAGTGG TGCGCAAGCT CGTTTCTGAG ATGCGTCAGA ACCCTGTTGA TGTTCTGTAT
CGTCCAAAGG ATGGAGCAAG TCCTGACGCT GCTGATGTGC TAATGGGCAT GTATCGCACA
GACATGCGAC ACAATACGGC AAAAATCGCG GTCAACGTCG CTGTTCGTGA GCAGATTGAA
TCTGGCGTAG GTGCGTGGCG TCTGGTCACT GACTACGAAG ATCAAAGTTC GACGAGCAAC
AATCAGGTTA TCCGTCGAGA GCCTATCCAT AGTGCCTGCT CCCATGTTAT CTGGGACAGC
AACAGCAAAC TGATGGACAA GTCTGACGCC CGTCACTGCA CAGTTATCCA CTCAATGAGC
CAGAATGGTT GGGAGGATTT CGCAGAAAAA TACGACCTCG ATGCTGATGA TATTCCATCA
TTCCAGAACC CCAACGATTG GGTATTTCCA TGGCTGACGC AGGACACAAT TCAGATCGCT
GAGTTTTACG AAGTGGTCGA GAAGAAAGAG ACGGCGTTTA TCTACCAAGA CCCGGTTACG
GGTGAGCCGG TAAGCTACTT TAAGCGCGAT ATTAAAGACG TCATCGACGA CCTGGCTGAT
AGTGGATTTA TCAAAATTGC AGAGCGCCAG ATTAAGCGTC GCCGGGTATA CAAATCAATT
ATCACCTGCA CCGCTGTACT CAAAGACAAG CAGCTCATTG CTGGCGAACA TATCCCCATT
GTTCCGGTAT TCGGCGAGTG GGGCTTCGTT GAAGATAAAG AAGTGTATGA GGGTGTCGTC
CGCCTGACAA AAGACGGTCA GCGTCTGCGC AACATGATTA TGTCGTTCAA CGCCGACATC
GTGGCCCGTA CTCCGAAGAA GAAGCCGTTC TTCTGGCCTG AACAGATTGC AGGCTTTGAG
CATATGTATG ACGGTAACGA CGATTACCCG TATTACCTGC TCAATCGCAC GGATGAGAAC
AACGGAGAAA TGCCAACTCA GCCGCTGGCA TACTATGAAA ATCCGGAAGT TCCACAGGCC
AATGCCTATA TGCTGGAAGC TGCAACCAGC GCAGTAAAAG AGGTTGCCAC TCTTGGTGTA
GATGCTGGGT CGGTTAATGG TAATCAGGTT GCATTCGATA CCGTAAACCA ACTCAATATG
CGGGCTGACC TTGAGACATA CGTGTTTCAG GATAATCTGG CTACCGCTAT GCGCCGTGAC
GGTGAGATTT ACCAGTCGAT AGTTAATGAC ATCTACGATG TTCCTCGCAA CGTGACAATC
ACCCTTGAGG ATGGCAGTGA AAAAGAGGTT CAGCTAATGG ATGAGGTTGT TGACCTTGCC
ACTGGTGAGC GGCAGGTACT GAACGATATC AGGGGGCGCT ATGAATGCTA CACGGATGTT
GGACCATCAT TCCAGTCCAT GAAGCAGCAA AACCGCGCAG AAATTCTTGA GTTGCTCGGC
AAGACGCCAC AGGGAACGCC AGAATATCAA CTGCTGTTGC TTCAGTACTT CACCCTGCTT
GATGGTAAAG GTGTCGAGAT GATGCGTGAC TATGCCAATA AGCAACTTAT TCAGATGGGC
GTTAAGAAGC CGGAAACACC TGAAGAGCAG CAATGGTTTG TCGAAGCGCA GCAGGCCAAA
CAAGGACAGC AAGACCCGGC AATGGTTCAG GCGCAGGGTG TGCTGTTGCA AGGTCAGGCT
GAACTGGCTA AAGCGCAGAA TCAGACGCTA TCTCTTCAAA TCGACGCGGC TAAAGTCGAA
GCTCAAAACC AACTTAACGC TGCGAAAATC GCAGAAATAT TCAACAATAT GGATCTCAAT
AAACAGTCCG AGTTTAGAGA GTTCCTCAAA ACCGTTGCTT CATTCCAGCA GGACCGCAGC
GAAGACGCTC GCGCAAATGC TGAGTTACTC CTTAAAGGCA ATGAACAGAC GCACAAGCAG
CGAATGGACA TTGCCAATAT CCTGCAATCG CAGAGACAAA ATCAACCTTC CGGCAGTGTA
GCCGAGACAC CTCAATAA
 
Protein sequence
MADNENRLES ILSRFDADWT ASDEARREAK NDLFFSRVSQ WDDWLSQYTT LQYRGQFDVV 
RPVVRKLVSE MRQNPVDVLY RPKDGASPDA ADVLMGMYRT DMRHNTAKIA VNVAVREQIE
SGVGAWRLVT DYEDQSSTSN NQVIRREPIH SACSHVIWDS NSKLMDKSDA RHCTVIHSMS
QNGWEDFAEK YDLDADDIPS FQNPNDWVFP WLTQDTIQIA EFYEVVEKKE TAFIYQDPVT
GEPVSYFKRD IKDVIDDLAD SGFIKIAERQ IKRRRVYKSI ITCTAVLKDK QLIAGEHIPI
VPVFGEWGFV EDKEVYEGVV RLTKDGQRLR NMIMSFNADI VARTPKKKPF FWPEQIAGFE
HMYDGNDDYP YYLLNRTDEN NGEMPTQPLA YYENPEVPQA NAYMLEAATS AVKEVATLGV
DAGSVNGNQV AFDTVNQLNM RADLETYVFQ DNLATAMRRD GEIYQSIVND IYDVPRNVTI
TLEDGSEKEV QLMDEVVDLA TGERQVLNDI RGRYECYTDV GPSFQSMKQQ NRAEILELLG
KTPQGTPEYQ LLLLQYFTLL DGKGVEMMRD YANKQLIQMG VKKPETPEEQ QWFVEAQQAK
QGQQDPAMVQ AQGVLLQGQA ELAKAQNQTL SLQIDAAKVE AQNQLNAAKI AEIFNNMDLN
KQSEFREFLK TVASFQQDRS EDARANAELL LKGNEQTHKQ RMDIANILQS QRQNQPSGSV
AETPQ