Gene SeD_A0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0631 
Symbol 
ID6875351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp635238 
End bp635675 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content44% 
IMG OID642783848 
Productphage lysozyme 
Protein accessionYP_002214534 
Protein GI198245383 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000760504 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0607386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCA GCAGTAACGG AATCACCAGA TTAAAACGTG AAGAAGGCGA AAGACTAAAA 
GCCTATCCAG ATAGCAGGGG GATACCAACC ATTGGGGTTG GACATACCGG AAAAGTGGAT 
GGTAATCCTG TCGTATCAGG GATGACAATC ACATCCGAAA AATCGTCTGA ACTGCTTAAA 
GAGGATTTGC AGTGGGTTGA AGATGCTATA AGTAGTCTTG TTCGCGTCAC GCTGAATCAG 
AACCAGTATG ATGCACTATG TAGCCTTATA TTCAATATAG GTAAATCAGC ATTTGCTGGA 
TCTACCGTTC TGCGCCAGTT GAATTTAAAG AATTACCAGG CAGCAGCAGA TGCTTTCCTG 
TTATGGAAAA AAGCTGGTAA GGACCCTGAT ATTCTCCTTC CTAGGAGGCG GCGAGAAAGA 
GCGCTGTTCC TGTCATGA
 
Protein sequence
MQISSNGITR LKREEGERLK AYPDSRGIPT IGVGHTGKVD GNPVVSGMTI TSEKSSELLK 
EDLQWVEDAI SSLVRVTLNQ NQYDALCSLI FNIGKSAFAG STVLRQLNLK NYQAAADAFL 
LWKKAGKDPD ILLPRRRRER ALFLS