Gene SeD_A0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0612 
Symbol 
ID6874753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp623435 
End bp624142 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content47% 
IMG OID642783830 
Productgp49 
Protein accessionYP_002214516 
Protein GI198241831 
COG category[S] Function unknown 
COG ID[COG4712] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0180237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00151942 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTGA ATAAATTCGA CGCCCCATTC AATCCTGAAG ATATCGAGTG GAGAATACAG 
CGAAGCGGAA AAACACGCGA TGGGATGGTG TGGGCTATGG TGCTGGCTTA TGTCACGAAC 
AGGGCAATCA TGAAACGCCT GGACGATATT TGCGGAAAAG CAGGATGGCG CAATGAATAT 
CGCGATATTC CAAACAATGG CGGCGTTGAA TGCGGCATAT CAATCAAGAT TGATTCCGAA 
TGGGTAACTA AATGGGATGC TGCTGAAAAC ACACAGGTAG AAGCCGTCAA AGGTGGCCGC 
TCCGGCGCAA TGAAGCGTGC TGCCGTTCAG TGGGGAATTG GTCGGTATCT GTATAACCTT 
GAGGAAGGTT TTGCGCAGAT ATCCAGTGAT AAGAAACAAG GATGGCACAG GGCCAAACTG 
AAGGATGGAA CAGGATTTTA CTGGCTCCCT CCATCGCTGC CGGACTGGGC CATGCCATCA 
TCATGCAATC AACCATCACC AGAAAATACC AACCAGAAAT CTCCATCGGT TGACTGCGAA 
CAAATCCTGA AAGACTTCAG CGATTATGCA GCAACAGAAA CTGACAAGAA AAAGCTAATT 
GAGAGATATC AGCATGACTG GCAATTATTG GCTGGTCACG ATGATGCGCA GACAAAATGC 
GTTCAGGTAA TGAACATCAG AGTTAACGAA CTAAAACAGG CGGCATAA
 
Protein sequence
MDLNKFDAPF NPEDIEWRIQ RSGKTRDGMV WAMVLAYVTN RAIMKRLDDI CGKAGWRNEY 
RDIPNNGGVE CGISIKIDSE WVTKWDAAEN TQVEAVKGGR SGAMKRAAVQ WGIGRYLYNL 
EEGFAQISSD KKQGWHRAKL KDGTGFYWLP PSLPDWAMPS SCNQPSPENT NQKSPSVDCE 
QILKDFSDYA ATETDKKKLI ERYQHDWQLL AGHDDAQTKC VQVMNIRVNE LKQAA