Gene SeD_A0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A0611 
Symbol 
ID6875379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp622928 
End bp623434 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content50% 
IMG OID642783829 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_002214515 
Protein GI198245309 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0751618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.00325806 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAGTA GAGGCGTAAA TAAGGTGATC ATCTTAGGCC GGGTCGGACA AGACCCGGAG 
GTTCGTTATT CACCATCAGG GACGGCGTTC GCTAACCTGA CAGTCGCTAC ATCAGAGCAG
TGGCGAGATA AACAGACTGG CGAACAAAAG GAGCAGACTG AATGGCATCG TGTTGCCGTA
GTCGGGAAAC TTGCTGAAGT CGTAGGGCGG TATGTGAAAA AAGGTGATCA GGTTTATTTC
GAGGGAATGC TGAGAACCAG AAAGTGGCAA GACCAGACAG GGCAAGACCG CTACACCACT
GAGATTAATG TTGGAATTAA TGGTGTGATG CAAATGCTTG GAGGCACTGG CGACAGCAAA
CAACAAGCAG CCGACAGGCA GTCACAGAAA CCACAGCAGC AACCATCACC AACACAACAT
AACGAGCCAC CGATGGATTT TGATGATGAT GTACCATTTG CACCAGTAAC TCTCCCCTTC
CCTCGTCACG CTATTCACGC AATTTAA
 
Protein sequence
MASRGVNKVI ILGRVGQDPE VRYSPSGTAF ANLTVATSEQ WRDKQTGEQK EQTEWHRVAV 
VGKLAEVVGR YVKKGDQVYF EGMLRTRKWQ DQTGQDRYTT EINVGINGVM QMLGGTGDSK
QQAADRQSQK PQQQPSPTQH NEPPMDFDDD VPFAPVTLPF PRHAIHAI